UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C17H12.5	C17H12.5	0	chrIV 6,816,742	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
2	skr-9	C52D10.7	n/a	chrIV 17,163,837	skr-9 encodes a homolog of Skp1 in S. cerevisiae, a component of the SCF (Skp1, Cullin, F-box) ubiquitin-ligase complex that regulates ubiquitin-mediated protein degradation; SKR-9 is required for posterior body morphogenesis, embryonic and larval development, and postembryonic cell proliferation.
3	kel-10	T16H12.6	n/a	chrIII 10,099,930	C. elegans KEL-10 protein; contains similarity to Pfam domains PF01344 (Kelch motif) (5), PF00651 (BTB/POZ domain) , PF07646 (Kelch motif) (2)contains similarity to Interpro domains IPR011043 (Galactose oxidase/kelch, beta-propeller), IPR000210 (BTB/POZ-like), IPR006652 (Kelch repeat type 1), IPR011333 (BTB/POZ fold), IPR011498 (Kelch repeat type 2), IPR015916 (Galactose oxidase, beta-propeller), IPR013069 (BTB/POZ), IPR013089 (Kelch related), IPR006651 (Kelch), IPR015915 (Kelch-type beta propeller)
4	ZK945.7	ZK945.7	n/a	chrII 10,107,878	contains similarity to Plasmodium falciparum Hypothetical protein.; TR:Q8IAV6
5	clec-239	Y102A5C.16	n/a	chrV 16,957,229	C. elegans CLEC-239 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
6	clec-117	B0432.12	n/a	chrII 296,649	C. elegans CLEC-117 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin), IPR000538 (Link)
7	F54D1.1	F54D1.1	n/a	chrIV 11,262,424	contains similarity to Interpro domain IPR004087 (K Homology)
8	C26C6.6	C26C6.6	n/a	chrI 7,506,305	contains similarity to Pfam domain PF00412 LIM domain contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)
9	T07E3.2	T07E3.2	n/a	chrIII 6,907,721
10	F43G9.8	F43G9.8	n/a	chrI 8,618,137	contains similarity to Dugesia japonica DjFGFR1.; TR:Q8MY86
11	C09F9.1	C09F9.1	n/a	chrII 14,698,971	contains similarity to Interpro domain IPR000345 (Cytochrome c heme-binding site)
12	F35E2.5	F35E2.5	n/a	chrI 11,742,773	contains similarity to Pfam domain PF03761 Domain of unknown function (DUF316) contains similarity to Interpro domain IPR005514 (Protein of unknown function DUF316)
13	F38A5.6	F38A5.6	n/a	chrIV 6,596,738	contains similarity to Pfam domain PF03114 BAR domain contains similarity to Interpro domain IPR004148 (BAR)
14	col-151	AC3.6	n/a	chrV 10,394,349	C. elegans COL-151 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)
15	ZK1128.3	ZK1128.3	n/a	chrIII 10,117,815	contains similarity to Mus musculus 2410017P07Rik protein.; TR:Q9CZE0
16	nhr-222	T24A6.11	n/a	chrV 3,542,513	C. elegans NHR-222 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
17	ZK84.5	ZK84.5	n/a	chrII 6,016,343
18	Y116A8A.7	Y116A8A.7	n/a	chrIV 16,830,442	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
19	Y75B8A.23	Y75B8A.23	n/a	chrIII 12,250,714	contains similarity to Homo sapiens Hypothetical protein; ENSEMBL:ENSP00000299601
20	C05D2.3	C05D2.3	n/a	chrIII 5,616,047	C05D2.3 generally resembles aromatic-L-amino-acid/L-histidine decarboxylases; however, its predicted protein sequence lacks six residues critical for AADC function; C05D2.3 is dispensable in mass RNAi assays.
21	F22D3.4	F22D3.4	n/a	chrII 6,925,039
22	C10G8.2	C10G8.2	n/a	chrV 5,314,980	contains similarity to Pfam domain PF00014 Kunitz/Bovine pancreatic trypsin inhibitor domain contains similarity to Interpro domain IPR002223 (Proteinase inhibitor I2, Kunitz metazoa)
23	W09C3.2	W09C3.2	n/a	chrI 4,712,438	contains similarity to Trichomonas vaginalis G3 Putative uncharacterized protein.; TR:A2E5Y7
24	Y57G11C.5	Y57G11C.5	n/a	chrIV 14,763,509	contains similarity to Interpro domain IPR000215 (Protease inhibitor I4, serpin)
25	C09D4.6	C09D4.6	n/a	chrI 5,486,821
26	Y45F10B.9	Y45F10B.9	n/a	chrIV 13,597,410	contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR000533 (Tropomyosin)
27	F22B5.5	F22B5.5	n/a	chrII 8,453,880	contains similarity to Pfam domain PF06852 Protein of unknown function (DUF1248) contains similarity to Interpro domain IPR009658 (Protein of unknown function DUF1248)
28	rmd-5	T23B3.3	n/a	chrI 6,711,598	C. elegans RMD-5 protein ; contains similarity to Xenopus laevis Protein FAM82C.; SW:Q5EAU9
29	K02F6.1	K02F6.1	n/a	chrII 2,555,138	contains similarity to Pfam domain PF00098 Zinc knuckle contains similarity to Interpro domains IPR009007 (Peptidase aspartic, catalytic), IPR013084 (Zinc finger, CCHC retroviral-type), IPR001969 (Peptidase aspartic, active site), IPR001878 (Zinc finger, CCHC-type)
30	snf-2	F55H12.1	n/a	chrI 8,873,592	C. elegans SNF-2 protein; contains similarity to Pfam domain PF00209 Sodium:neurotransmitter symporter family contains similarity to Interpro domain IPR000175 (Sodium:neurotransmitter symporter)
31	C01G10.1	C01G10.1	n/a	chrV 15,102,337	contains similarity to Pfam domains PF02206 (Domain of unknown function) , PF00023 (Ankyrin repeat) , PF00533 (BRCA1 C Terminus (BRCT) domain) contains similarity to Interpro domains IPR002110 (Ankyrin), IPR003125 (Protein of unknown function WSN), IPR001357 (BRCT)
32	T16G12.7	T16G12.7	n/a	chrIII 10,039,210	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
33	F35H8.4	F35H8.4	n/a	chrII 9,559,658	contains similarity to Streptococcus pyogenes Hypothetical protein.; TR:Q8P0S2
34	R05H5.4	R05H5.4	n/a	chrII 10,198,961	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif), IPR008266 (Tyrosine protein kinase, active site)
35	W01B6.5	W01B6.5	n/a	chrIV 10,077,459	contains similarity to Pfam domains PF07714 (Protein tyrosine kinase) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR017441 (Protein kinase ATP binding, conserved site), IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related), IPR000980 (SH2 motif)
36	F23C8.1	F23C8.1	n/a	chrI 2,447,555
37	F42A9.3	F42A9.3	n/a	chrIV 8,617,701
38	C02F5.2	C02F5.2	n/a	chrIII 8,249,732
39	K10D6.3	K10D6.3	n/a	chrV 11,201,218	contains similarity to Homo sapiens HMG-BOX transcription factor BBX; ENSEMBL:ENSP00000319742
40	cyb-1	ZC168.4	n/a	chrIV 10,736,076	cyb-1 encodes a cyclin B homolog that appears to be required both for embryogenesis (via maternally encoded CYB-1) and for postembryonic development and fertility (via zygotically encoded CYB-1); removing maternal product in cyb-1(RNAi) embryos causes multiple nuclei, and affected embryos arrest development at an early embryonic stage.
41	R12E2.8	R12E2.8	n/a	chrI 4,157,147	contains similarity to Galaxea fascicularis Galaxin.; TR:Q8I6S1
42	K08E7.4	K08E7.4	n/a	chrIV 12,570,933	contains similarity to Plasmodium falciparum Gene 11-1 protein precursor.; TR:Q8I6U6
43	F44D12.3	F44D12.3	n/a	chrIV 10,022,456	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
44	Y43F8C.9	Y43F8C.9	n/a	chrV 19,646,679	contains similarity to Dictyostelium discoideum Myb-like protein.; SW:P34127
45	D2062.7	D2062.7	n/a	chrII 2,617,140
46	F49E11.7	F49E11.7	n/a	chrIV 13,054,029	contains similarity to Pfam domain PF00149 Calcineurin-like phosphoesterase contains similarity to Interpro domains IPR004843 (Metallophosphoesterase), IPR006186 (Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase)
47	M03E7.3	M03E7.3	n/a	chrV 5,615,596
48	K02A11.2	K02A11.2	n/a	chrI 9,745,095	contains similarity to Saccharomyces cerevisiae Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ribosome biogenesis; SGD:YGR159C
49	C10G11.10	C10G11.10	n/a	chrI 6,305,695
50	R07C3.4	R07C3.4	n/a	chrII 934,987	contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)