UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C17H1.5	C17H1.5	0	chrI 13,115,023	contains similarity to Mus musculus Inner centromere protein.; SW:Q9WU62
2	sre-4	T13F2.5	n/a	chrIV 9,782,834	C. elegans SRE-4 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
3	sre-51	C50E10.10	n/a	chrII 12,312,675	C. elegans SRE-51 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
4	AH10.2	AH10.2	n/a	chrV 14,157,204	contains similarity to Plasmodium falciparum RIFIN.; TR:Q8I211
5	str-220	C42D4.9	n/a	chrIV 7,170,609	str-220 encodes a seven transmembrane chemoreceptor; microarray analyses indicate that str-220 is expressed at higher levels in the AWB olfactory neurons than the AFD thermosensory neurons; anatomical expression studies confirm expression in the AWB neurons; expression of str-220 in AWB is regulated, in part, by the KIN-29 Ser/Thr kinase.
6	str-83	B0213.7	n/a	chrV 3,978,022	C. elegans STR-83 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR000344 (Nematode chemoreceptor, Sra), IPR003002 (7TM chemoreceptor, subfamily 1)
7	srz-53	Y102A5C.23	n/a	chrV 16,977,768	C. elegans SRZ-53 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
8	flp-27	C25H3.5	n/a	chrII 5,681,799	C. elegans FLP-27 protein ;
9	T21D9.2	T21D9.2	n/a	chrX 2,095,709	contains similarity to Interpro domain IPR008075 (Lipocalin-1 receptor)
10	srt-30	R08F11.2	n/a	chrV 3,799,527	C. elegans SRT-30 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR001991 (Sodium:dicarboxylate symporter)
11	T24D5.4	T24D5.4	n/a	chrX 12,597,224	contains similarity to Pfam domain PF00069 Protein kinase domain contains similarity to Interpro domains IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR017442 (Serine/threonine protein kinase-related)
12	T22E7.2	T22E7.2	n/a	chrI 5,767,620	contains similarity to Pfam domain PF01529 DHHC zinc finger domain contains similarity to Interpro domains IPR001594 (Zinc finger, DHHC-type), IPR007087 (Zinc finger, C2H2-type)
13	T23D5.8	T23D5.8	n/a	chrV 15,747,913	contains similarity to Interpro domain IPR000168 (Nematode 7TM chemoreceptor (probably olfactory))
14	T02H6.10	T02H6.10	n/a	chrII 680,250
15	Y17G7B.13	Y17G7B.13	n/a	chrII 12,045,368	contains similarity to Pfam domain PF06090 Domain of unknown function (DUF941) contains similarity to Interpro domain IPR009286 (Protein of unknown function DUF941)
16	W09C3.3	W09C3.3	n/a	chrI 4,708,334	contains similarity to Pfam domain PF01482 Domain of unknown function DUF13 contains similarity to Interpro domain IPR002485 (Protein of unknown function DUF13)
17	T08G5.8	T08G5.8	n/a	chrV 14,048,191	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
18	F10A3.12	F10A3.12	n/a	chrV 16,164,918	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
19	F09G8.7	F09G8.7	n/a	chrIII 8,268,070
20	C46C2.3	C46C2.3	n/a	chrIV 9,226,726	contains similarity to Tropheryma whipplei DNA repair protein RecN.; TR:Q83NU4
21	T28C6.7	T28C6.7	n/a	chrIV 8,828,801	contains similarity to Interpro domain IPR009055 (UvrB, C-terminal UvrC-binding)
22	sri-9	Y102A5C.29	n/a	chrV 17,002,496	C. elegans SRI-9 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR000565 (DNA topoisomerase, type IIA, subunit B)
23	W04D2.5	W04D2.5	n/a	chrV 12,493,975	contains similarity to Pfam domain PF00411 Ribosomal protein S11 contains similarity to Interpro domain IPR001971 (Ribosomal protein S11)
24	sra-7	AH6.11	n/a	chrII 9,545,368	C. elegans SRA-7 protein; contains similarity to Pfam domain PF02117 C.elegans Sra family integral membrane protein contains similarity to Interpro domain IPR000344 (Nematode chemoreceptor, Sra)
25	tba-5	F16D3.1	n/a	chrI 8,355,612	tba-5 encodes one of nine C. elegans alpha tubulins; by homology, TBA-5 is predicted to be a component of microtubules; as loss of tba-5 function via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, TBA-5 likely functions redundantly with other alpha tubulins as a basic component of cellular architecture that may play additional roles in processes such as cell division, cell movement, and intracellular transport.
26	T22D1.6	T22D1.6	n/a	chrIV 6,899,771
27	srh-127	F37B4.1	n/a	chrV 2,894,429	C. elegans SRH-127 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
28	ZK353.5	ZK353.5	n/a	chrIII 8,394,543
29	F09F9.3	F09F9.3	n/a	chrX 4,120,310
30	col-148	C12D8.8	n/a	chrV 10,242,222	C. elegans COL-148 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain) , PF01391 (Collagen triple helix repeat (20 copies)) (2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR003979 (Tropoelastin), IPR000694 (Proline-rich region), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat)
31	tax-2	F36F2.5	n/a	chrI 9,023,241	tax-2 is orthologous to the human gene ROD PHOTORECEPTOR CNG-CHANNEL BETA SUBUNIT (CNGB1; OMIM:600724), which when mutated leads to disease.
32	F58D12.1	F58D12.1	n/a	chrV 14,052,371	contains similarity to White spot syndrome virus Wsv359 (WSSV418).; TR:Q8VAP2
33	sre-22	F36D1.2	n/a	chrI 11,284,373	C. elegans SRE-22 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
34	math-6	C16C4.11	n/a	chrII 1,884,167	C. elegans MATH-6 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
35	F16G10.4	F16G10.4	n/a	chrII 2,369,673	contains similarity to Pfam domain PF02343 Domain of unknown function DUF130 contains similarity to Interpro domains IPR003326 (Protein of unknown function DUF130), IPR002371 (Flagellar hook-associated protein)
36	srh-297	C17F4.4	n/a	chrII 3,229,698	C. elegans SRH-297 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR006084 (DNA repair protein (XPGC)/yeast Rad), IPR003002 (7TM chemoreceptor, subfamily 1)
37	B0284.3	B0284.3	n/a	chrIII 4,380,175	contains similarity to Interpro domain IPR000215 (Protease inhibitor I4, serpin)
38	Y116A8C.11	Y116A8C.11	n/a	chrIV 16,989,256	contains similarity to Streptococcus pyogenes serotype M5 M protein, serotype 5 precursor.; SW:P02977
39	R155.4	R155.4	n/a	chrIII 1,978,876	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domains IPR008967 (p53-like transcription factor, DNA-binding), IPR003125 (Protein of unknown function WSN), IPR005427 (Salmonella/Shigella invasin protein C)
40	ZK1010.4	ZK1010.4	n/a	chrIII 12,982,581	contains similarity to Pfam domain PF01682 DB module contains similarity to Interpro domain IPR002602 (Protein of unknown function DB)
41	srbc-66	T24A6.5	n/a	chrV 3,531,539	C. elegans SRBC-66 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
42	srh-49	C10G11.4	n/a	chrI 6,298,750	C. elegans SRH-49 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
43	ZK795.1	ZK795.1	n/a	chrIV 12,551,089	contains similarity to Pfam domain PF03770 Inositol polyphosphate kinase contains similarity to Interpro domain IPR005522 (Inositol polyphosphate kinase)
44	srbc-21	C45H4.7	n/a	chrV 2,156,083	C. elegans SRBC-21 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR001118 (Na+/H+ exchanger, isoform 3 (NHE3))
45	sri-37	D2062.2	n/a	chrII 2,630,401	C. elegans SRI-37 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
46	C30E1.8	C30E1.8	n/a	chrX 16,917,982	contains similarity to Pfam domain PF03409 Protein of unknown function (DUF274) contains similarity to Interpro domain IPR005071 (Protein of unknown function DUF274)
47	C55B6.4	C55B6.4	n/a	chrX 7,187,869
48	C35D6.3	C35D6.3	n/a	chrIV 16,347,259	contains similarity to Interpro domain IPR003100 (Argonaute and Dicer protein, PAZ)
49	B0205.5	B0205.5	n/a	chrI 10,740,393
50	sri-46	K07E8.11	n/a	chrII 670,321	C. elegans SRI-46 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)