UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C16D6.2	C16D6.2	0	chrX 12,544,267	contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR001402 (Prolactin-releasing peptide receptor), IPR017452 (GPCR, rhodopsin-like superfamily), IPR000405 (Galanin receptor), IPR000611 (Neuropeptide Y receptor), IPR000276 (GPCR, rhodopsin-like)
2	nhr-79	T26H2.9	n/a	chrV 19,209,750	C. elegans NHR-79 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
3	ins-24	ZC334.3	n/a	chrI 14,031,394	ins-24 encodes an insulin-like peptide of the insulin superfamily of proteins (OMIM:176730, 147440); INS-24 is one of 38 insulin-like peptides in C. elegans, but as loss of INS-24 function via RNA-mediated interference does not result in any abnormalities, the precise role of INS-24 in C. elegans development is not yet clear.
4	far-5	F15B9.3	n/a	chrV 12,996,198	far-5 encodes a member of a class of fatty acid-and retinol-binding proteins that are known to be secreted by parasitic nematodes and plants; far-5 binds lipid in fluorescence-based assays, however, the precise function of far-5 is not known.
5	ZK384.3	ZK384.3	n/a	chrV 18,730,891	contains similarity to Pfam domain PF00026 Eukaryotic aspartyl protease contains similarity to Interpro domains IPR009007 (Peptidase aspartic, catalytic), IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR001461 (Peptidase A1)
6	C01B12.5	C01B12.5	n/a	chrII 10,817	contains similarity to Pfam domain PF01062 Bestrophin contains similarity to Interpro domains IPR000615 (Bestrophin), IPR000802 (Arsenical pump membrane protein)
7	gcy-35	T04D3.4	n/a	chrI 13,329,337	C. elegans GCY-35 protein; contains similarity to Pfam domains PF07700 (Heme NO binding) , PF07701 (Heme NO binding associated) , PF00211 (Adenylate and Guanylate cyclase catalytic domain) contains similarity to Interpro domains IPR011644 (Haem NO binding), IPR011645 (Haem NO binding associated), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase)
8	srd-30	F07C4.5	n/a	chrV 7,630,532	C. elegans SRD-30 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
9	wht-6	T26A5.1	n/a	chrIII 6,473,428	C. elegans WHT-6 protein; contains similarity to Pfam domains PF01061 (ABC-2 type transporter) , PF00005 (ABC transporter) contains similarity to Interpro domains IPR003439 (ABC transporter-like), IPR003593 (AAA+ ATPase, core), IPR013525 (ABC-2 type transporter)
10	C06C6.6	C06C6.6	n/a	chrV 15,990,153	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domain IPR003125 (Protein of unknown function WSN)
11	str-4	C50B6.10	n/a	chrV 13,338,836	C. elegans STR-4 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
12	C37A2.6	C37A2.6	n/a	chrI 6,788,535	contains similarity to Pfam domain PF06325 Ribosomal protein L11 methyltransferase (PrmA) contains similarity to Interpro domain IPR010456 (Ribosomal L11 methyltransferase)
13	F46B3.16	F46B3.16	n/a	chrV 20,630,275
14	sulp-8	ZK287.2	n/a	chrV 9,671,599	sulp-8 encodes one of eight C. elegans members of the sulfate permease family of anion transporters; by homology, SULP-8 is predicted to function as an anion transporter that regulates cellular pH and volume via transmembrane movement of electrolytes and fluids; a SULP-8::GFP fusion is expressed in the basolateral membrane of the excretory cell, intestine, and rectal gland cells.
15	BE10.4	BE10.4	n/a	chrIII 12,815,049	contains similarity to Interpro domain IPR000694 (Proline-rich region)
16	fbxa-165	C08E3.8	n/a	chrII 1,615,632	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
17	B0336.3	B0336.3	n/a	chrIII 5,713,118	contains similarity to Pfam domain PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar) contains similarity to Interpro domains IPR000571 (Zinc finger, CCCH-type), IPR000694 (Proline-rich region), IPR000504 (RNA recognition motif, RNP-1), IPR012677 (Nucleotide-binding, alpha-beta plait), IPR001984 (Peptidase S16, Lon protease)
18	C56E6.6	C56E6.6	n/a	chrII 6,542,233	contains similarity to Pfam domain PF00560 Leucine Rich Repeat contains similarity to Interpro domains IPR000483 (Cysteine-rich flanking region, C-terminal), IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype)
19	clec-183	T20D3.1	n/a	chrIV 9,328,354	C. elegans CLEC-183 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
20	srz-70	C09G12.6	n/a	chrIV 3,478,198	C. elegans SRZ-70 protein ;
21	H35B03.1	H35B03.1	n/a	chrIV 5,727,641
22	Y39E4B.6	Y39E4B.6	n/a	chrIII 13,072,610	contains similarity to Rattus norvegicus Nucleolar protein NOP5 (Nucleolar protein 5) (Nopp140 associatedsprotein).; SW:NOP5_RAT
23	sre-14	C42C1.1	n/a	chrIV 12,260,640	C. elegans SRE-14 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domains IPR000326 (Phosphatidic acid phosphatase type 2/haloperoxidase), IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
24	E01B7.1	E01B7.1	n/a	chrV 17,926,717	contains similarity to Interpro domains IPR001763 (Rhodanese-like), IPR000694 (Proline-rich region)
25	srh-296	Y94A7B.4	n/a	chrV 17,811,540	C. elegans SRH-296 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
26	Y113G7B.24	Y113G7B.24	n/a	chrV 20,231,897	contains similarity to Pfam domain PF05916 Synthetic lethal mutants of dpb11-1 five contains similarity to Interpro domain IPR008591 (GINS complex, Sld5 component)
27	srh-44	B0334.7	n/a	chrII 11,516,530	C. elegans SRH-44 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
28	K11H12.4	K11H12.4	n/a	chrIV 674,988	contains similarity to Pfam domain PF03409 Protein of unknown function (DUF274) contains similarity to Interpro domain IPR005071 (Protein of unknown function DUF274)
29	F18E3.10	F18E3.10	n/a	chrV 7,424,056	contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
30	C10A4.1	C10A4.1	n/a	chrX 7,417,182	contains similarity to Pfam domain PF05699 hAT family dimerisation domain contains similarity to Interpro domain IPR008906 (HAT dimerisation)
31	gcy-21	F22E5.3	n/a	chrII 2,662,347	gcy-21 is predicted to encode a guanylate cyclase.
32	srx-117	C14C11.5	n/a	chrV 5,645,343	C. elegans SRX-117 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
33	C32H11.1	C32H11.1	n/a	chrIV 12,913,842	contains similarity to Pfam domain PF02408 CUB-like domain contains similarity to Interpro domains IPR000859 (CUB), IPR003366 (CUB-like region)
34	C32H11.4	C32H11.4	n/a	chrIV 12,922,267	contains similarity to Pfam domain PF02408 CUB-like domain contains similarity to Interpro domain IPR003366 (CUB-like region)
35	K03E5.1	K03E5.1	n/a	chrI 3,431,349	contains similarity to Pfam domain PF00431 CUB domain contains similarity to Interpro domains IPR002172 (Low density lipoprotein-receptor, class A, cysteine-rich), IPR000859 (CUB)
36	tsp-8	F33C8.3	n/a	chrX 14,727,975	tsp-8 is orthologous to the human gene KANGAI 1 (SUPPRESSION OF TUMORIGENICITY 6, PROSTATE; CD82 ANTIGEN (R2 LEUKOCYTE ANTIGEN, ANTIGEN DETECTED BY MONOCLONAL AND ANTIBODY IA4)) (KAI1; OMIM:600623), which when mutated leads to disease.
37	hyl-2	K02G10.6	n/a	chrX 4,698,095	hyl-2 encodes a predicted transmembrane protein that is related to Saccharomyces cerevisiae LAG1 (longevity assurance gene), a protein preferentially expressed in young yeasts; by homology, HYL-2 is predicted to have several possible functions, including regulation of lipid, particularly ceramide, biosynthesis, regulation of lipid transport, and regulation of protein translocation in the endoplasmic reticulum ; however, as loss of hyl-2 activity via RNA-mediated interference (RNAi) does not result in any obvious abnormalities, the precise role of hyl-2 in C. elegans development and/or behavior is not yet known.
38	F27C1.11	F27C1.11	n/a	chrI 5,439,915	contains similarity to Pfam domains PF00612 (IQ calmodulin-binding motif) , PF03607 (Doublecortin) , PF01477 (PLAT/LH2 domain) contains similarity to Interpro domains IPR001024 (Lipoxygenase, LH2), IPR008976 (Lipase/lipooxygenase, PLAT/LH2), IPR003533 (Doublecortin), IPR000048 (IQ calmodulin-binding region)
39	W06G6.10	W06G6.10	n/a	chrV 16,646,964	contains similarity to Escherichia coli O157:H7 C4-type zinc finger protein (TraR family).; TR:Q8X2P7
40	C50B8.5	C50B8.5	n/a	chrV 13,582,800	contains similarity to Candida albicans Hypothetical membrane protein.; TR:O94057
41	T20D3.11	T20D3.11	n/a	chrIV 9,349,648	contains similarity to Anopheles gambiae str PEST AGAP009276-PA (Fragment).; TR:Q7PVH5
42	C14A6.5	C14A6.5	n/a	chrV 18,164,125	contains similarity to Arabidopsis thaliana Calreticulin 2 precursor.; SW:CRT2_ARATH
43	F31D5.2	F31D5.2	n/a	chrII 4,216,907	contains similarity to Pfam domains PF07690 (Major Facilitator Superfamily) , PF05978 (Eukaryotic protein of unknown function (DUF895)) contains similarity to Interpro domains IPR010291 (Protein of unknown function DUF895, eukaryotic), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
44	nhr-149	C03G6.12	n/a	chrV 7,349,121	C. elegans NHR-149 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
45	F55C7.2	F55C7.2	n/a	chrI 4,005,729
46	cyp-34A8	B0213.14	n/a	chrV 3,966,310	C. elegans CYP-34A8 protein; contains similarity to Pfam domain PF00067 Cytochrome P450 contains similarity to Interpro domains IPR002397 (Cytochrome P450, B-class), IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR002403 (Cytochrome P450, E-class, group IV)
47	C50A2.4	C50A2.4	n/a	chrIV 1,160,591	contains similarity to Pfam domain PF00178 Ets-domain contains similarity to Interpro domains IPR000418 (Ets), IPR011991 (Winged helix repressor DNA-binding)
48	F32B5.2	F32B5.2	n/a	chrI 2,698,698
49	C05C10.1	C05C10.1	n/a	chrII 9,918,735	contains similarity to Pfam domain PF00328 Histidine acid phosphatase contains similarity to Interpro domain IPR000560 (Histidine acid phosphatase)
50	F28C6.5	F28C6.5	n/a	chrII 8,599,990	contains similarity to Mus musculus Activity-dependent neuroprotector (Activity-dependent neuroprotectivesprotein).; SW:ADNP_MOUSE