UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C08E8.2	C08E8.2	0	chrV 18,354,641	contains similarity to Pfam domain PF03088 Strictosidine synthase contains similarity to Interpro domains IPR004141 (Strictosidine synthase), IPR011042 (Six-bladed beta-propeller, TolB-like)
2	F38H12.5	F38H12.5	n/a	chrV 4,082,125	contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
3	nhr-79	T26H2.9	n/a	chrV 19,209,750	C. elegans NHR-79 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
4	F55F1.1	F55F1.1	n/a	chrX 2,779,060	contains similarity to Homo sapiens Rho family guanine-nucleotide exchange factor; ENSEMBL:ENSP00000328118
5	Y17D7B.2	Y17D7B.2	n/a	chrV 18,788,749	contains similarity to Xenopus laevis Phosphoinositide-3-kinase.; TR:Q8UUU2
6	srt-67	B0238.5	n/a	chrV 5,256,766	C. elegans SRT-67 protein; contains similarity to Pfam domains PF01461 (7TM chemoreceptor) , PF01748 (Caenorhabditis serpentine receptor-like protein) contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR002651 (Protein of unknown function DUF32)
7	T22F3.8	T22F3.8	n/a	chrV 3,603,747	contains similarity to Pfam domain PF07690 Major Facilitator Superfamily contains similarity to Interpro domains IPR007114 (Major facilitator superfamily), IPR011701 (Major facilitator superfamily MFS-1), IPR016196 (MFS general substrate transporter)
8	sri-38	D2062.8	n/a	chrII 2,611,611	C. elegans SRI-38 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
9	B0564.9	B0564.9	n/a	chrIV 13,137,002	contains similarity to Pfam domains PF00560 (Leucine Rich Repeat) , PF07723 (Leucine Rich Repeat) contains similarity to Interpro domain IPR006553 (Leucine-rich repeat, cysteine-containing subtype)
10	nhr-252	ZK6.2	n/a	chrV 405,309	C. elegans NHR-252 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000679 (Zinc finger, GATA-type), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
11	Y40H7A.2	Y40H7A.2	n/a	chrIV 15,156,851	contains similarity to Pfam domain PF05050 Protein of unknown function (DUF672) contains similarity to Interpro domain IPR007744 (Protein of unknown function DUF672)
12	D1081.4	D1081.4	n/a	chrI 8,475,188	contains similarity to Pfam domains PF00071 (Ras family) , PF08477 (Miro-like protein) contains similarity to Interpro domains IPR003577 (Ras small GTPase, Ras type), IPR013684 (Miro-like), IPR003578 (Ras small GTPase, Rho type), IPR005225 (Small GTP-binding protein), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR013753 (Ras)
13	R03G5.6	R03G5.6	n/a	chrX 7,808,111
14	K04F1.8	K04F1.8	n/a	chrV 1,667,509
15	F53H4.4	F53H4.4	n/a	chrX 15,867,475	contains similarity to Salmonella typhi Hypothetical protein STY0658.; TR:Q8Z8J9
16	C07H4.1	C07H4.1	n/a	chrII 9,091,587	contains similarity to Oceanobacillus iheyensis Hypothetical conserved protein.; TR:Q8ETI8
17	C28F5.1	C28F5.1	n/a	chrII 7,506,343
18	B0041.1	B0041.1	n/a	chrI 4,665,314
19	C50H2.6	C50H2.6	n/a	chrV 9,921,737	contains similarity to Pfam domain PF00501 AMP-binding enzyme contains similarity to Interpro domain IPR000873 (AMP-dependent synthetase and ligase)
20	fbxa-213	Y37H2C.3	n/a	chrV 18,268,033	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
21	F23A7.3	F23A7.3	n/a	chrX 16,221,101	contains similarity to Schizosaccharomyces pombe Endocytosis protein end4 (SLA2 protein homolog).; SW:Q9P6L5
22	smgl-1	F20G4.1	n/a	chrI 7,922,384	C. elegans SMGL-1 protein; contains similarity to Interpro domain IPR011046 (WD40 repeat-like)
23	F15G9.3	F15G9.3	n/a	chrX 9,710,815	contains similarity to Plasmodium falciparum Prolyl-t-RNA synthase, putative (EC 6.1.1.15).; TR:Q8I2Q5
24	ZK688.2	ZK688.2	n/a	chrIII 7,902,682	contains similarity to Pfam domain PF01062 Bestrophin contains similarity to Interpro domain IPR000615 (Bestrophin)
25	F11D5.6	F11D5.6	n/a	chrX 3,325,709
26	spe-38	Y52B11A.1	n/a	chrI 10,965,401	C. elegans SPE-38 protein ;
27	T27E7.4	T27E7.4	n/a	chrIV 14,534,258	contains similarity to Pelomedusa subrufa NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3).; SW:NU5M_PELSU
28	K04F1.6	K04F1.6	n/a	chrV 1,671,713	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
29	B0034.2	B0034.2	n/a	chrII 5,944,245
30	Y75B8A.10	Y75B8A.10	n/a	chrIII 12,181,866	contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR006662 (Thioredoxin-related)
31	math-17	C16C4.9	n/a	chrII 1,880,205	C. elegans MATH-17 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
32	T22E5.6	T22E5.6	n/a	chrX 6,415,238	contains similarity to Interpro domain IPR002016 (Haem peroxidase, plant/fungal/bacterial)
33	snt-2	F42G9.7	n/a	chrIII 789,889	C. elegans SNT-2 protein; contains similarity to Pfam domain PF00168 C2 domain contains similarity to Interpro domains IPR001565 (Synaptotagmin), IPR008973 (C2 calcium/lipid-binding region, CaLB), IPR000008 (C2 calcium-dependent membrane targeting)
34	nhr-153	C13C4.1	n/a	chrV 12,105,417	C. elegans NHR-153 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core), IPR001781 (Zinc finger, LIM-type)
35	W04C9.5	W04C9.5	n/a	chrI 464,897	contains similarity to Pfam domain PF00071 Ras family contains similarity to Interpro domains IPR003577 (Ras small GTPase, Ras type), IPR001806 (Ras GTPase), IPR003579 (Ras small GTPase, Rab type), IPR013753 (Ras)
36	ZC487.2	ZC487.2	n/a	chrV 6,721,684
37	srd-70	F48F5.4	n/a	chrV 20,450,660	C. elegans SRD-70 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
38	R09H10.1	R09H10.1	n/a	chrIV 10,601,257	contains similarity to Pfam domain PF01482 Domain of unknown function DUF13 contains similarity to Interpro domain IPR002485 (Protein of unknown function DUF13)
39	srw-23	F49A5.8	n/a	chrV 16,874,669	C. elegans SRW-23 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
40	acr-21	F27B3.2	n/a	chrIII 6,584,504	acr-21 encodes an alpha subunit of nicotinic acetylcholine receptor (nAChR); ACR-21 is a highly divergent member of the 'ACR-16' class of nAChR subunits, which includes ACR-7, ACR-9, ACR-10, ACR-11, ACR-14, ACR-15, ACR-16, and ACR-19, and is most closely related to the alpha-7 subunits of vertebrate nAChRs.
41	W06G6.2	W06G6.2	n/a	chrV 16,629,439	contains similarity to Bombyx mori Hunchback protein (Fragment).; SW:HUNB_BOMMO
42	srw-43	F14F8.5	n/a	chrV 16,686,204	C. elegans SRW-43 protein; contains similarity to Pfam domain PF06976 Protein of unknown function (DUF1300) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR010726 (Protein of unknown function DUF1300), IPR001991 (Sodium:dicarboxylate symporter), IPR000276 (GPCR, rhodopsin-like)
43	srw-7	R08F11.5	n/a	chrV 3,806,992	C. elegans SRW-7 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
44	H14A12.5	H14A12.5	n/a	chrIII 7,467,767
45	F58G1.8	F58G1.8	n/a	chrII 12,925,362	contains similarity to Interpro domain IPR009022 (Elongation factor G, III and V)
46	sru-35	C33D9.4	n/a	chrIV 8,789,328	C. elegans SRU-35 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
47	T13A10.2	T13A10.2	n/a	chrIV 6,253,526	contains similarity to Pfam domain PF00097 Zinc finger, C3HC4 type (RING finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
48	F40A3.7	F40A3.7	n/a	chrV 7,897,725	contains similarity to Pfam domain PF00001 7 transmembrane receptor (rhodopsin family) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
49	F54H5.3	F54H5.3	n/a	chrII 6,622,759	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
50	F02E11.3	F02E11.3	n/a	chrII 3,273,416	contains similarity to Interpro domain IPR010993 (Sterile alpha motif homology)