UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C05D9.3	C05D9.3	0	chrX 1,114,346	contains similarity to Pfam domain PF07974 EGF-like domain contains similarity to Interpro domains IPR002369 (Integrin beta subunit, N-terminal), IPR001169 (Integrin beta subunit, C-terminal), IPR015812 (Integrin beta subunit), IPR003659 (Plexin/semaphorin/integrin), IPR013032 (EGF-like region, conserved site), IPR013111 (EGF, extracellular)
2	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
3	C18A11.4	C18A11.4	n/a	chrX 8,046,427	contains similarity to Interpro domain IPR000980 (SH2 motif)
4	T06E8.2	T06E8.2	n/a	chrV 10,036,032
5	B0284.3	B0284.3	n/a	chrIII 4,380,175	contains similarity to Interpro domain IPR000215 (Protease inhibitor I4, serpin)
6	osm-12	Y75B8A.12	n/a	chrIII 12,196,633	C. elegans OSM-12 protein; contains similarity to Interpro domain IPR016575 (Bardet-Biedl syndrome 7 protein)
7	srh-272	F37B4.4	n/a	chrV 2,864,166	C. elegans SRH-272 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
8	clec-213	C50E3.3	n/a	chrV 7,606,857	C. elegans CLEC-213 protein; contains similarity to Interpro domain IPR016187 (C-type lectin fold)
9	cnc-5	R09B5.10	n/a	chrV 1,445,607	cnc-5 encodes one of six C. elegans caenacin peptides; CNC-5 is predicted to be a secreted protein that, based upon similarity to CNC-2, -4, and -6, may function as an antimicrobial peptide in the innate immune response.
10	srd-41	F17A2.6	n/a	chrX 12,327,467	C. elegans SRD-41 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR003006 (Immunoglobulin/major histocompatibility complex, conserved site)
11	C01G5.7	C01G5.7	n/a	chrIV 6,518,588
12	C56E6.4	C56E6.4	n/a	chrII 6,527,652	contains similarity to Pfam domain PF03607 Doublecortin contains similarity to Interpro domain IPR003533 (Doublecortin)
13	math-16	C16C4.8	n/a	chrII 1,878,171	C. elegans MATH-16 protein; contains similarity to Pfam domain PF00917 MATH domain contains similarity to Interpro domains IPR008974 (TRAF-like), IPR002083 (MATH)
14	srx-131	F09F3.2	n/a	chrV 13,846,060	C. elegans SRX-131 protein ;
15	K04H8.2	K04H8.2	n/a	chrI 14,254,220	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domains IPR006583 (CW), IPR016187 (C-type lectin fold), IPR001304 (C-type lectin)
16	srg-30	W02F12.7	n/a	chrV 6,717,559	C. elegans SRG-30 protein; contains similarity to Pfam domain PF02118 C.elegans Srg family integral membrane protein contains similarity to Interpro domain IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
17	Y113G7A.14	Y113G7A.14	n/a	chrV 20,132,595	contains similarity to Lumpy skin disease virus LSDV134 variola virus B22R-like protein.; TR:Q91MN0
18	F46E10.3	F46E10.3	n/a	chrV 6,519,002	contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated type 2)
19	R106.1	R106.1	n/a	chrX 17,479,990
20	H04D03.3	H04D03.3	n/a	chrIII 10,443,934	contains similarity to Interpro domain IPR016024 (Armadillo-type fold)
21	B0432.1	B0432.1	n/a	chrII 298,462
22	T26A5.4	T26A5.4	n/a	chrIII 6,461,112	contains similarity to Pfam domain PF00534 Glycosyl transferases group 1 contains similarity to Interpro domain IPR001296 (Glycosyl transferase, group 1)
23	srbc-8	C18B10.5	n/a	chrV 7,484,197	C. elegans SRBC-8 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
24	C48A7.2	C48A7.2	n/a	chrIV 7,395,373	contains similarity to Pfam domain PF01384 Phosphate transporter family contains similarity to Interpro domains IPR000804 (Clathrin adaptor, sigma subunit/coatomer, zeta subunit), IPR001204 (Phosphate transporter)
25	srh-71	T10D4.5	n/a	chrII 3,124,197	C. elegans SRH-71 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
26	F19G12.3	F19G12.3	n/a	chrX 1,425,941	contains similarity to Pfam domain PF02170 PAZ domain contains similarity to Interpro domain IPR003100 (Argonaute and Dicer protein, PAZ)
27	F29A7.8	F29A7.8	n/a	chrII 2,757,825	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
28	F53E10.5	F53E10.5	n/a	chrV 2,597,474
29	R155.4	R155.4	n/a	chrIII 1,978,876	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domains IPR008967 (p53-like transcription factor, DNA-binding), IPR003125 (Protein of unknown function WSN), IPR005427 (Salmonella/Shigella invasin protein C)
30	clec-140	T05A7.2	n/a	chrII 4,675,089	C. elegans CLEC-140 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
31	F26A1.7	F26A1.7	n/a	chrIII 4,819,598
32	gcy-27	C06A12.4	n/a	chrIV 17,436,419	C. elegans GCY-27 protein; contains similarity to Pfam domains PF00211 (Adenylate and Guanylate cyclase catalytic domain) , PF00069 (Protein kinase domain) contains similarity to Interpro domains IPR002290 (Serine/threonine protein kinase), IPR011009 (Protein kinase-like), IPR000719 (Protein kinase, core), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase), IPR001245 (Tyrosine protein kinase), IPR017442 (Serine/threonine protein kinase-related)
33	F52E10.2	F52E10.2	n/a	chrX 16,282,921	contains similarity to Borrelia burgdorferi EppA.; TR:Q840B4
34	gcy-9	ZK455.2	n/a	chrX 11,335,257	gcy-9 encodes a membrane guanylyl cyclase; gcy-9 expression is reportedly weak and variable in non-neuronal tissues.
35	ZK1010.4	ZK1010.4	n/a	chrIII 12,982,581	contains similarity to Pfam domain PF01682 DB module contains similarity to Interpro domain IPR002602 (Protein of unknown function DB)
36	K04F1.13	K04F1.13	n/a	chrV 1,652,895	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
37	str-238	R09E12.4	n/a	chrV 768,810	C. elegans STR-238 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
38	C45E5.2	C45E5.2	n/a	chrIV 5,742,716	contains similarity to Pfam domain PF00704 Glycosyl hydrolases family 18 contains similarity to Interpro domains IPR011583 (Chitinase II), IPR017853 (Glycoside hydrolase, catalytic core), IPR001223 (Glycoside hydrolase, family 18, catalytic domain), IPR013781 (Glycoside hydrolase, subgroup, catalytic core)
39	F20E11.7	F20E11.7	n/a	chrV 17,465,622	contains similarity to Pfam domain PF03436 Domain of unknown function (DUF281) contains similarity to Interpro domains IPR005098 (Protein of unknown function DUF281), IPR006662 (Thioredoxin-related)
40	sra-11	F44F4.13	n/a	chrII 10,909,485	sra-11 encodes an orphan, G protein-coupled seven-transmembrane receptor; SRA-11 is expressed in three classes of interneurons, AIA, AIY, and AVB throughout larval and adult stages, and analysis of sra-11 mutations indicates that sra-11 activity in AIY is essential for olfactory imprinting; sra-11 expression in AIY is positively regulated by the TTX-3 and CEH-23 homeodomain proteins, with TTX-3 required for both initiation and maintenance of expression and CEH-23 required solely for maintenance.
41	srx-101	F40H7.4	n/a	chrII 3,690,100	C. elegans SRX-101 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
42	W06G6.12	W06G6.12	n/a	chrV 16,652,565	contains similarity to Methanosarcina mazei Hypothetical protein MM2681.; TR:Q8PTN2
43	F02E11.4	F02E11.4	n/a	chrII 3,276,774	contains similarity to Interpro domain IPR002625 (Smr protein/MutS2 C-terminal)
44	F41E6.8	F41E6.8	n/a	chrV 8,600,475	contains similarity to Pfam domain PF03380 Caenorhabditis protein of unknown function, DUF282 contains similarity to Interpro domain IPR005044 (Protein of unknown function DUF282, Caenorhabditis species)
45	C18A11.6	C18A11.6	n/a	chrX 8,034,037
46	glt-4	T22E5.2	n/a	chrX 6,405,125	glt-4 encodes an ortholog of glutamate/aspartate and neutral amino acid transporters.
47	F09F9.3	F09F9.3	n/a	chrX 4,120,310
48	nas-10	K09C8.3	n/a	chrX 10,962,779	nas-10 encodes an astacin-like metalloprotease.
49	nhr-118	F13A2.8	n/a	chrV 4,408,904	C. elegans NHR-118 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core), IPR000003 ()
50	srw-26	T05G11.3	n/a	chrV 15,931,865	C. elegans SRW-26 protein; contains similarity to Pfam domain PF06976 Protein of unknown function (DUF1300) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR010726 (Protein of unknown function DUF1300)