UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	C01G5.8	C01G5.8	0	chrIV 6,550,691	contains similarity to Pfam domain PF08774 VRR-NUC domain contains similarity to Interpro domain IPR014883 (VRR-NUC)
2	clec-131	W10G11.7	n/a	chrII 3,575,385	C. elegans CLEC-131 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
3	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
4	F52C6.14	F52C6.14	n/a	chrII 1,932,827	contains similarity to Interpro domain IPR013032 (EGF-like region, conserved site)
5	str-207	F26G5.4	n/a	chrV 4,952,370	C. elegans STR-207 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
6	str-204	F10D2.1	n/a	chrV 7,160,334	C. elegans STR-204 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
7	srv-6	C52B9.5	n/a	chrX 4,258,053	C. elegans SRV-6 protein ;
8	srx-112	T24E12.8	n/a	chrII 3,764,010	C. elegans SRX-112 protein ;
9	srx-19	T05A12.1	n/a	chrIV 6,874,033	C. elegans SRX-19 protein ;
10	tag-52	C02F12.4	n/a	chrX 3,676,290	C. elegans TAG-52 protein; contains similarity to Pfam domain PF00621 RhoGEF domain contains similarity to Interpro domains IPR000219 (Dbl homology (DH) domain), IPR001849 (Pleckstrin-like), IPR011993 (Pleckstrin homology-type)
11	str-63	C17B7.1	n/a	chrV 3,352,167	C. elegans STR-63 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
12	K10F12.6	K10F12.6	n/a	chrIII 399,060
13	srh-228	C35D6.1	n/a	chrIV 16,340,479	C. elegans SRH-228 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
14	C18E3.4	C18E3.4	n/a	chrI 4,202,730
15	C18H9.2	C18H9.2	n/a	chrII 6,690,893	contains similarity to Xenopus laevis PERQ amino acid-rich with GYF domain-containing protein 2s(Trinucleotide repeat-containing gene 15 protein).; SW:Q5U236
16	C03B1.2	C03B1.2	n/a	chrX 6,370,343
17	W06G6.12	W06G6.12	n/a	chrV 16,652,565	contains similarity to Methanosarcina mazei Hypothetical protein MM2681.; TR:Q8PTN2
18	T26A5.4	T26A5.4	n/a	chrIII 6,461,112	contains similarity to Pfam domain PF00534 Glycosyl transferases group 1 contains similarity to Interpro domain IPR001296 (Glycosyl transferase, group 1)
19	scl-21	Y43F8B.5	n/a	chrV 19,495,187	C. elegans SCL-21 protein; contains similarity to Pfam domain PF00188 SCP-like extracellular protein contains similarity to Interpro domains IPR014044 (SCP-like extracellular), IPR001283 (Allergen V5/Tpx-1 related)
20	srw-57	F36G9.1	n/a	chrV 15,954,286	C. elegans SRW-57 protein; contains similarity to Pfam domain PF06976 Protein of unknown function (DUF1300) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR010726 (Protein of unknown function DUF1300), IPR000276 (GPCR, rhodopsin-like)
21	ceh-30	C33D12.7	n/a	chrX 3,064,554	ceh-30 encodes a homeodomain protein most similar to Drosophila and mammalian BarH1 (OMIM:605211) which function in neuronal cell fate determination; the precise biological role of CEH-30 in C. elegans development and/or behavior is not yet known.
22	xbx-4	C23H5.3	n/a	chrIV 2,115,124	C. elegans XBX-4 protein ;
23	C54D10.8	C54D10.8	n/a	chrV 12,445,902	contains similarity to Homo sapiens cDNA FLJ44007 fis, clone TESTI4023762; ENSEMBL:ENSP00000364402
24	Y75B8A.31	Y75B8A.31	n/a	chrIII 12,353,159	contains similarity to Homo sapiens Isoform 1 of UPF0528 protein C5orf21 precursor; ENSEMBL:ENSP00000265139
25	W02H3.1	W02H3.1	n/a	chrX 11,104,112	contains similarity to Bacillus halodurans Myo-inositol 2-dehydrogenase.; TR:Q9KAH1
26	srbc-23	C45H4.9	n/a	chrV 2,154,343	C. elegans SRBC-23 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
27	ZK816.3	ZK816.3	n/a	chrX 3,348,370
28	nhr-38	K01H12.3	n/a	chrIV 9,711,556	C. elegans NHR-38 protein; contains similarity to Pfam domain PF00105 Zinc finger, C4 type (two domains) contains similarity to Interpro domains IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type)
29	str-18	T23D5.6	n/a	chrV 15,741,213	C. elegans STR-18 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
30	C04A11.2	C04A11.2	n/a	chrX 13,667,311	contains similarity to Homo sapiens Putative protein TPRXL; ENSEMBL:ENSP00000322097
31	srj-27	T01G5.3	n/a	chrV 15,126,838	C. elegans SRJ-27 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
32	K03H6.4	K03H6.4	n/a	chrIV 1,519,644
33	fbxb-108	F08D12.6	n/a	chrII 2,766,099	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function.
34	B0365.7	B0365.7	n/a	chrV 13,144,616	contains similarity to Pfam domain PF08393 Dynein heavy chain, N-terminal region 2 contains similarity to Interpro domains IPR013602 (Dynein heavy chain, N-terminal region 2), IPR000215 (Protease inhibitor I4, serpin)
35	srh-122	R08H2.5	n/a	chrV 15,377,228	C. elegans SRH-122 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
36	Y39E4B.11	Y39E4B.11	n/a	chrIII 13,206,068
37	W06G6.7	W06G6.7	n/a	chrV 16,640,273	contains similarity to Pfam domains PF00622 (SPRY domain) , PF00041 (Fibronectin type III domain) , PF00097 (Zinc finger, C3HC4 type (RING finger)) , PF00643 (B-box zinc finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR008957 (Fibronectin, type III-like fold), IPR001870 (B302, (SPRY)-like), IPR003961 (Fibronectin, type III), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR003649 (B-box, C-terminal), IPR003877 (SPla/RYanodine receptor SPRY), IPR000315 (Zinc finger, B-box)
38	C06G4.1	C06G4.1	n/a	chrIII 7,988,768	contains similarity to Pfam domain PF00013 KH domain contains similarity to Interpro domains IPR004087 (K Homology), IPR004088 (K Homology, type 1)
39	C02B10.6	C02B10.6	n/a	chrIV 5,071,570	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR016130 (Protein-tyrosine phosphatase, active site), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type), IPR000387 (Protein-tyrosine phosphatase)
40	srh-291	Y94A7B.3	n/a	chrV 17,807,015	C. elegans SRH-291 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
41	srh-71	T10D4.5	n/a	chrII 3,124,197	C. elegans SRH-71 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
42	srbc-41	F16B4.10	n/a	chrV 1,613,815	C. elegans SRBC-41 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR000832 (GPCR, family 2, secretin-like)
43	srh-140	Y6E2A.6	n/a	chrV 15,723,067	C. elegans SRH-140 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR000484 (Photosynthetic reaction centre, L and M subunits)
44	nhr-159	C17E7.7	n/a	chrV 3,876,286	C. elegans NHR-159 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
45	D2007.3	D2007.3	n/a	chrIII 8,148,979
46	C18A11.6	C18A11.6	n/a	chrX 8,034,037
47	T22D1.6	T22D1.6	n/a	chrIV 6,899,771
48	D1044.4	D1044.4	n/a	chrIII 5,521,831
49	F46E10.3	F46E10.3	n/a	chrV 6,519,002	contains similarity to Pfam domain PF07735 F-box associated contains similarity to Interpro domain IPR012885 (F-box associated type 2)
50	vps-33.1	B0303.9	n/a	chrIII 8,702,024	C. elegans VPS-33.1 protein; contains similarity to Pfam domain PF00995 Sec1 family contains similarity to Interpro domain IPR001619 (Sec1-like protein)