UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	B0496.5	B0496.5	0	chrIV 7,421,847	contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR000276 (GPCR, rhodopsin-like)
2	F47B8.1	F47B8.1	n/a	chrV 14,314,024
3	clec-140	T05A7.2	n/a	chrII 4,675,089	C. elegans CLEC-140 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
4	srbc-24	C45H4.10	n/a	chrV 2,152,386	C. elegans SRBC-24 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
5	srbc-54	F54B8.11	n/a	chrV 15,833,053	C. elegans SRBC-54 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
6	nas-10	K09C8.3	n/a	chrX 10,962,779	nas-10 encodes an astacin-like metalloprotease.
7	T27F6.8	T27F6.8	n/a	chrI 12,498,624	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.
8	srd-48	F17A2.9	n/a	chrX 12,336,853	C. elegans SRD-48 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
9	sre-41	Y57A10B.5	n/a	chrII 12,388,981	C. elegans SRE-41 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
10	F13C5.1	F13C5.1	n/a	chrX 603,249
11	srj-16	T06A1.2	n/a	chrV 1,955,236	C. elegans SRJ-16 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
12	F52E10.2	F52E10.2	n/a	chrX 16,282,921	contains similarity to Borrelia burgdorferi EppA.; TR:Q840B4
13	T10G3.2	T10G3.2	n/a	chrV 13,478,579	contains similarity to Mus musculus Transmembrane protein TIARP.; TR:Q91W31
14	C05C12.6	C05C12.6	n/a	chrIV 11,232,367	contains similarity to Interpro domain IPR000345 (Cytochrome c heme-binding site)
15	clec-214	C50E3.1	n/a	chrV 7,611,567	C. elegans CLEC-214 protein; contains similarity to Interpro domains IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like)
16	T06E8.2	T06E8.2	n/a	chrV 10,036,032
17	B0336.12	B0336.12	n/a	chrIII 5,710,236
18	C41G6.12	C41G6.12	n/a	chrV 15,207,410	contains similarity to Interpro domain IPR000168 (Nematode 7TM chemoreceptor (probably olfactory))
19	Y62H9A.9	Y62H9A.9	n/a	chrX 11,896,785	contains similarity to Plasmodium falciparum Hypothetical protein.; TR:Q8I659
20	glt-4	T22E5.2	n/a	chrX 6,405,125	glt-4 encodes an ortholog of glutamate/aspartate and neutral amino acid transporters.
21	ncx-5	Y32F6B.2	n/a	chrV 10,488,232	ncx-5 encodes a putative 4Na[+]/1Ca[2+],1K[+] exchanger, orthologous to human SLC24A1-5 and paralogous to NCX-4; NCX-5 is predicted to export free cytoplasmic Ca[2+] with low affinity but high capacity, being complemented by low-capacity/high-affinity Ca[2+] ATPase pumps such as MCA-1/-3; NCX-5 has tandem Calx-alpha domains predicted to carry out ion transport; NCX-5 has no obvious function in mass RNAi assays.
22	nhr-156	C17E7.1	n/a	chrV 3,906,529	C. elegans NHR-156 protein; contains similarity to Pfam domain PF00105 Zinc finger, C4 type (two domains) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type)
23	F32B4.5	F32B4.5	n/a	chrI 11,519,244	contains similarity to Homo sapiens BTB/POZ domain-containing protein KCTD16; ENSEMBL:ENSP00000329906
24	srw-43	F14F8.5	n/a	chrV 16,686,204	C. elegans SRW-43 protein; contains similarity to Pfam domain PF06976 Protein of unknown function (DUF1300) contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR010726 (Protein of unknown function DUF1300), IPR001991 (Sodium:dicarboxylate symporter), IPR000276 (GPCR, rhodopsin-like)
25	W06G6.7	W06G6.7	n/a	chrV 16,640,273	contains similarity to Pfam domains PF00622 (SPRY domain) , PF00041 (Fibronectin type III domain) , PF00097 (Zinc finger, C3HC4 type (RING finger)) , PF00643 (B-box zinc finger) contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR008957 (Fibronectin, type III-like fold), IPR001870 (B302, (SPRY)-like), IPR003961 (Fibronectin, type III), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR003649 (B-box, C-terminal), IPR003877 (SPla/RYanodine receptor SPRY), IPR000315 (Zinc finger, B-box)
26	F29A7.8	F29A7.8	n/a	chrII 2,757,825	contains similarity to Pfam domain PF08277 PAN-like domain contains similarity to Interpro domain IPR006583 (CW)
27	F09G8.7	F09G8.7	n/a	chrIII 8,268,070
28	F15E6.9	F15E6.9	n/a	chrIV 4,296,304
29	T05B9.2	T05B9.2	n/a	chrII 11,257,607	contains similarity to Rattus norvegicus Fibrillin-2.; TR:Q9WUH9
30	srh-272	F37B4.4	n/a	chrV 2,864,166	C. elegans SRH-272 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
31	sri-15	F15H9.2	n/a	chrI 12,152,667	C. elegans SRI-15 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
32	F58E2.3	F58E2.3	n/a	chrIV 3,468,626	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
33	C30E1.2	C30E1.2	n/a	chrX 16,927,410
34	C50E3.9	C50E3.9	n/a	chrV 7,599,821	contains similarity to Interpro domain IPR001991 (Sodium:dicarboxylate symporter)
35	T15D6.9	T15D6.9	n/a	chrI 12,392,786	contains similarity to Pfam domain PF07801 Protein of unknown function (DUF1647) contains similarity to Interpro domain IPR012444 (Protein of unknown function DUF1647)
36	W06G6.2	W06G6.2	n/a	chrV 16,629,439	contains similarity to Bombyx mori Hunchback protein (Fragment).; SW:HUNB_BOMMO
37	fbxa-41	F52D2.1	n/a	chrX 1,949,939	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
38	nas-33	K04E7.3	n/a	chrX 6,453,429	C. elegans NAS-33 protein; contains similarity to Pfam domains PF00090 (Thrombospondin type 1 domain) , PF01400 (Astacin (Peptidase family M12A)) contains similarity to Interpro domains IPR000884 (Thrombospondin, type I), IPR000742 (EGF-like, type 3), IPR006030 (Molluscan rhodopsin C-terminal tail), IPR006025 (Peptidase M, neutral zinc metallopeptidases, zinc-binding site), IPR000694 (Proline-rich region), IPR001506 (Peptidase M12A, astacin), IPR006026 (Peptidase, metallopeptidases), IPR000859 (CUB), IPR013032 (EGF-like region, conserved site)
39	F11A5.7	F11A5.7	n/a	chrV 16,205,976	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
40	T21D9.2	T21D9.2	n/a	chrX 2,095,709	contains similarity to Interpro domain IPR008075 (Lipocalin-1 receptor)
41	B0546.5	B0546.5	n/a	chrIV 3,389,078	contains similarity to Pfam domain PF06681 Protein of unknown function (DUF1182) contains similarity to Interpro domain IPR010601 (Protein of unknown function DUF1182)
42	C15H9.2	C15H9.2	n/a	chrX 6,119,566	contains similarity to Pfam domain PF00651 BTB/POZ domain contains similarity to Interpro domains IPR000210 (BTB/POZ-like), IPR011333 (BTB/POZ fold), IPR013069 (BTB/POZ)
43	sri-14	M01G12.1	n/a	chrI 12,135,356	C. elegans SRI-14 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
44	B0284.3	B0284.3	n/a	chrIII 4,380,175	contains similarity to Interpro domain IPR000215 (Protease inhibitor I4, serpin)
45	R155.4	R155.4	n/a	chrIII 1,978,876	contains similarity to Pfam domain PF02206 Domain of unknown function contains similarity to Interpro domains IPR008967 (p53-like transcription factor, DNA-binding), IPR003125 (Protein of unknown function WSN), IPR005427 (Salmonella/Shigella invasin protein C)
46	F41D9.1	F41D9.1	n/a	chrX 8,380,568	contains similarity to Pfam domains PF07653 (Variant SH3 domain) , PF00018 (SH3 domain) , PF00566 (TBC domain) , PF02759 (RUN domain) contains similarity to Interpro domains IPR000195 (RabGAP/TBC), IPR001452 (Src homology-3), IPR004012 (RUN), IPR013315 (Spectrin alpha chain), IPR011511 (Variant SH3)
47	nhr-208	R07B7.15	n/a	chrV 12,095,111	C. elegans NHR-208 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
48	srj-8	T28A11.9	n/a	chrV 3,248,476	C. elegans SRJ-8 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
49	C16H3.1	C16H3.1	n/a	chrX 17,618,555	contains similarity to Pfam domain PF00036 EF hand contains similarity to Interpro domains IPR001125 (Recoverin), IPR011992 (EF-Hand type), IPR002048 (Calcium-binding EF-hand)
50	H16D19.3	H16D19.3	n/a	chrI 12,639,596	contains similarity to Interpro domains IPR015880 (Zinc finger, C2H2-like), IPR007087 (Zinc finger, C2H2-type)