UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	B0294.1	B0294.1	2.0000000000000002e-81	chrX 1,897,093
2	nhr-79	T26H2.9	n/a	chrV 19,209,750	C. elegans NHR-79 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor) , PF00105 (Zinc finger, C4 type (two domains)) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR001723 (Steroid hormone receptor), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
3	R06F6.7	R06F6.7	n/a	chrII 10,811,543	contains similarity to Saccharomyces cerevisiae FLO5- and FLO8-determined flocculation are considerably less sensitive to mannose than FLO1-determined flocculation.; SGD:YHR211W
4	cyp-14A5	F08F3.7	n/a	chrV 5,422,142	cyp-14A5 encodes a member of the cytochrome P450 family.
5	F58B4.3	F58B4.3	n/a	chrV 10,930,269	contains similarity to Homo sapiens similar to bA88M19.1 (EGF-like-domain multiple 5 protein); ENSEMBL:ENSP00000223618
6	C15C7.4	C15C7.4	n/a	chrX 3,146,822
7	C02B8.3	C02B8.3	n/a	chrX 8,139,820
8	C17H12.10	C17H12.10	n/a	chrIV 6,808,208
9	T19C3.3	T19C3.3	n/a	chrIII 612,715
10	ttr-23	T21C9.8	n/a	chrV 10,589,462	C. elegans TTR-23 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)
11	EGAP4.1	EGAP4.1	n/a	chrX 8,727,142
12	T23B3.6	T23B3.6	n/a	chrI 6,707,989
13	numr-2	F08F8.1	n/a	chrIII 7,365,432	C. elegans NUMR-2 protein ;
14	flp-7	F49E10.3	n/a	chrX 5,886,304	flp-7 encodes an MVRFamide-containing peptide that, upon injection into A. suum, produces paralysis and loss of locomotory waveforms, increased body length, and decreased cAMP production.
15	pqn-48	K07D4.8	n/a	chrII 4,040,965	The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77).
16	F53C3.5	F53C3.5	n/a	chrII 3,900,316	contains similarity to Pfam domain PF01705 CX module contains similarity to Interpro domain IPR002619 (Protein of unknown function CX)
17	nlp-5	F35C11.1	n/a	chrII 8,243,059	C. elegans NLP-5 protein ;
18	ttr-26	Y51A2D.11	n/a	chrV 18,559,496	C. elegans TTR-26 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domains IPR001534 (Transthyretin-like), IPR008964 (Invasin/intimin cell-adhesion)
19	nlp-15	CC4.2	n/a	chrI 12,991,841	C. elegans NLP-15 protein ; contains similarity to Procambarus clarkii Orcokinin peptides type A precursor [Contains: Orcomyotropin-likespeptide; Orcokinin; Orcokinin-like peptide].; SW:Q9NL83
20	D1069.1	D1069.1	n/a	chrII 341,505	contains similarity to Interpro domain IPR004032 (PMP-22/EMP/MP20)
21	ins-30	ZC334.2	n/a	chrI 14,035,617	ins-30 encodes an insulin-like peptide.
22	T01G1.2	T01G1.2	n/a	chrIV 11,354,720	contains similarity to Escherichia coli HtrA suppressor protein (Protein prlF).; SW:SOHA_ECOLI
23	C01G10.6	C01G10.6	n/a	chrV 15,087,952	contains similarity to Staphylococcus aureus Staphylococcal secretory antigen ssaA2 precursor.; SW:Q6GED5
24	T16G1.7	T16G1.7	n/a	chrV 12,933,975	T16G1.7 is orthologous to the human gene ALIAS DLC1~CANDIDATE TUMOR SUPPRESSOR GENE (DLEC1; OMIM:604050), which when mutated leads to disease.
25	nlp-37	F48B9.4	n/a	chrX 2,163,570	C. elegans NLP-37 protein ;
26	ttr-21	F09F3.6	n/a	chrV 13,854,097	C. elegans TTR-21 protein; contains similarity to Pfam domain PF01060 Transthyretin-like family contains similarity to Interpro domain IPR001534 (Transthyretin-like)
27	flp-14	Y37D8A.15	n/a	chrIII 12,912,600	flp-14 encodes four copies of a single FMRFamide-related short peptide neurotransmitter; FLP-14 can increase pharyngeal action potential frequency, although its exact role in C. elegans neurotransmission is not yet clear.
28	F12A10.2	F12A10.2	n/a	chrII 5,495,367
29	R05A10.2	R05A10.2	n/a	chrIV 14,178,019	contains similarity to Saccharomyces cerevisiae Actin-binding protein that stabilizes actin filaments; Tpm1, the main tropomyosin, is required for the formation and stability of actin cables in vivo which direct polarized cell growth and the distribution of several organelles.; SGD:YNL079C
30	snt-4	T23H2.2	n/a	chrI 6,438,658	C. elegans SNT-4 protein; contains similarity to Pfam domain PF00168 C2 domain contains similarity to Interpro domains IPR001565 (Synaptotagmin), IPR008973 (C2 calcium/lipid-binding region, CaLB), IPR000008 (C2 calcium-dependent membrane targeting)
31	F47B8.3	F47B8.3	n/a	chrV 14,322,155	contains similarity to Pfam domain PF00462 Glutaredoxin contains similarity to Interpro domains IPR002109 (Glutaredoxin), IPR012336 (Thioredoxin-like fold)
32	tig-2	F39G3.8	n/a	chrV 4,728,435	The tig-2 gene, like dbl-1, daf-7, and unc-129, encodes a TGF-beta-like protein.
33	cal-4	T07G12.1	n/a	chrIV 10,528,321	cal-4 encodes one of five predicted C. elegans calcium-binding calmodulin homologs (the others being CAL-1, CAL-2, CAL-3 and CMD-1); as loss of cal-4 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of CAL-4 in C. elegans development and/or behavior is not yet known.
34	K07A1.3	K07A1.3	n/a	chrI 9,587,656	contains similarity to Pfam domain PF03412 Peptidase C39 family contains similarity to Interpro domain IPR005074 (Peptidase C39, bacteriocin processing)
35	glb-27	W01C9.5	n/a	chrII 8,548,030	glb-27 encodes a globin whose expression is probably induced by anoxia in a HIF-1-dependent manner; glb-27 transcription is higher in L3 and dauers than in young adults; glb-27 has no obvious function in mass RNAi assays.
36	F20B6.4	F20B6.4	n/a	chrX 4,194,407
37	gpc-1	K02A4.2	n/a	chrX 12,881,921	The gpc-1 gene encodes a heterotrimeric guanine nucleotide-binding protein gamma subunit, expressed specifically in sensory neurons, that is involved in taste adaptation.
38	nlp-3	F48C11.3	n/a	chrX 13,178,076	nlp-3 encodes a neuropeptide-like protein of the GFxGF family with similarity to orcokinins, highly conserved peptides native to crustaceans that enhance hindgut contractions; NLP-3 is expressed in neurons in the head, pharynx, and vulva, and in the intestine; the precise role of NLP-3 in nervous system function and development is not yet clear.
39	tsp-4	F53B2.2	n/a	chrIV 12,519,672	C. elegans TSP-4 protein; contains similarity to Pfam domain PF00335 Tetraspanin family contains similarity to Interpro domains IPR000301 (CD9/CD37/CD63 antigen), IPR008952 (Tetraspanin)
40	egl-20	W08D2.1	n/a	chrIV 9,813,959	egl-20 encodes a member of the WNT family of developmental signaling proteins that affects migration of QL and QR and their descendents; expressed in muscle and epidermal cells at the posterior of the worm.
41	Y37H2C.1	Y37H2C.1	n/a	chrV 18,275,256	contains similarity to Homo sapiens SIDT1 protein; ENSEMBL:ENSP00000377416
42	F44G4.6	F44G4.6	n/a	chrII 9,001,316	contains similarity to Interpro domain IPR001209 (Ribosomal protein S14)
43	xbx-3	M04D8.6	n/a	chrIII 10,036,315	C. elegans XBX-3 protein ;
44	C47D2.1	C47D2.1	n/a	chrX 8,215,243
45	F40F8.4	F40F8.4	n/a	chrII 11,139,746	contains similarity to Interpro domain IPR001680 (WD40 repeat)
46	Y39A3A.4	Y39A3A.4	n/a	chrIII 2,074,752	contains similarity to Pfam domain PF00102 Protein-tyrosine phosphatase contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR000242 (Protein-tyrosine phosphatase, receptor/non-receptor type)
47	sul-2	D1014.1	n/a	chrV 8,158,775	sul-2 is orthologous to the human gene ARYLSULFATASE A (ARSA; OMIM:250100), which when mutated leads to metachromatic leukodystrophy.
48	F10F2.4	F10F2.4	n/a	chrIII 4,624,572	contains similarity to Pfam domain PF00560 Leucine Rich Repeat contains similarity to Interpro domains IPR000483 (Cysteine-rich flanking region, C-terminal), IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype)
49	sru-44	T08G3.8	n/a	chrV 16,467,175	C. elegans SRU-44 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
50	F10E9.1	F10E9.1	n/a	chrIII 8,323,702