UCSC C. elegans Gene Sorter

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UCSC C. elegans Gene Sorter

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#	Name	WormBase	BLASTP E-Value	Genome Position	Description
1	AH9.4	AH9.4	0	chrX 2,272,675	contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
2	srh-145	F26D2.4	n/a	chrV 16,411,251	C. elegans SRH-145 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domains IPR003002 (7TM chemoreceptor, subfamily 1), IPR001991 (Sodium:dicarboxylate symporter)
3	C17C3.13	C17C3.13	n/a	chrII 5,568,064
4	T26E4.5	T26E4.5	n/a	chrV 15,787,827	contains similarity to Interpro domain IPR008996 ()
5	F49C5.4	F49C5.4	n/a	chrII 12,539,002	contains similarity to Pfam domain PF00069 (Eukaryotic protein kinase domain)
6	M02A10.1	M02A10.1	n/a	chrX 707,178
7	nspb-2	F38A5.12	n/a	chrIV 6,591,852	C. elegans NSPB-2 protein; contains similarity to Pfam domain PF07312 Protein of unknown function (DUF1459) contains similarity to Interpro domain IPR009924 (Protein of unknown function DUF1459)
8	srt-37	F47D2.8	n/a	chrV 4,280,809	C. elegans SRT-37 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domains IPR002651 (Protein of unknown function DUF32), IPR000609 (Serpentine gamma receptor, Caenorhabditis species)
9	T01G6.1	T01G6.1	n/a	chrV 498,392	contains similarity to Pfam domains PF01370 (NAD dependent epimerase/dehydratase family) , PF00106 (short chain dehydrogenase) contains similarity to Interpro domains IPR002424 (Insect alcohol dehydrogenase family), IPR001509 (NAD-dependent epimerase/dehydratase), IPR003560 (2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase), IPR002347 (Glucose/ribitol dehydrogenase), IPR002198 (Short-chain dehydrogenase/reductase SDR), IPR016040 (NAD(P)-binding)
10	twk-33	W06D12.5	n/a	chrV 17,712,140	C. elegans TWK-33 protein; contains similarity to Pfam domain PF07885 Ion channel contains similarity to Interpro domains IPR003280 (Potassium channel, two pore-domain), IPR013099 (Ion transport 2), IPR003092 (Potassium channel, two pore-domain, TASK)
11	F52F10.4	F52F10.4	n/a	chrV 1,544,140	contains similarity to Pfam domain PF01757 Acyltransferase family contains similarity to Interpro domains IPR002656 (Acyltransferase 3), IPR006621 (Nose resistant to fluoxetine-4, N-terminal)
12	F52D2.5	F52D2.5	n/a	chrX 1,974,154
13	srt-65	C03A7.10	n/a	chrV 5,171,907	C. elegans SRT-65 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
14	cyn-16	Y17G7B.9	n/a	chrII 12,032,664	cyn-16 encodes a highly diverged member of the cyclophilin family; CYN-16 exhibits low levels of peptidyl-prolyl cis/trans isomerase activity in vitro that is insensitive to the presence of cyclosporin A; a cyn-16::gfp fusion protein is expressed in the intestine during larval and adult stages of development, with particularly strong expression seen in the anterior and posterior ends; in dauer larvae, the cyn-16::gfp reporter is expressed in cell bodies and processes of ventral cord neurons and is no longer visible in the intestine.
15	str-248	C55A1.3	n/a	chrV 15,628,858	C. elegans STR-248 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
16	R05D7.1	R05D7.1	n/a	chrI 12,162,955	contains similarity to Kluyveromyces lodderae Truncated cytochrome oxidase subunit 2 (Fragment).; TR:Q7YG01
17	Y39F10A.2	Y39F10A.2	n/a	chrII 780,543	contains similarity to Pfam domain PF06079 Apyrase contains similarity to Interpro domain IPR009283 (Apyrase)
18	H14A12.5	H14A12.5	n/a	chrIII 7,467,767
19	srx-131	F09F3.2	n/a	chrV 13,846,060	C. elegans SRX-131 protein ;
20	D1053.3	D1053.3	n/a	chrX 11,731,700	contains similarity to Interpro domain IPR001208 (MCM)
21	K03D10.3	K03D10.3	n/a	chrI 14,122,952	The K03D10.3 gene encodes a MYST acetyltransferase orthologous to the Drosophila MALES-ABSENT-ON-THE-FIRST (MOF) and CG1894 proteins, the human MOF protein, and the S. cerevisiae SAS2 protein.
22	fbxa-214	Y38A10A.4	n/a	chrV 6,068,922	This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
23	clec-44	R07C3.12	n/a	chrII 921,144	C. elegans CLEC-44 protein; contains similarity to Pfam domain PF00059 Lectin C-type domain contains similarity to Interpro domains IPR000859 (CUB), IPR016187 (C-type lectin fold), IPR016186 (C-type lectin-like), IPR001304 (C-type lectin)
24	nhr-156	C17E7.1	n/a	chrV 3,906,529	C. elegans NHR-156 protein; contains similarity to Pfam domain PF00105 Zinc finger, C4 type (two domains) contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000324 (Vitamin D receptor), IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type)
25	nhr-280	C29F9.13	n/a	chrIII 130,464	C. elegans NHR-280 protein; contains similarity to Pfam domain PF00104 Ligand-binding domain of nuclear hormone receptor contains similarity to Interpro domains IPR008946 (Nuclear hormone receptor, ligand-binding), IPR000536 (Nuclear hormone receptor, ligand-binding, core)
26	hda-4	C10E2.3	n/a	chrX 16,737,045	hda-4 encodes a class II histone deacetylase that contains a putative MEF-2 DNA binding domain, a nuclear localization signal domain, and a single catalytic domain and may affect locomotion, body morphology, and growth; interacts with MEF-2 in in vitro assays and is expressed in body-wall muscle, neurons, and hypodermal seam cells
27	F47G4.8	F47G4.8	n/a	chrI 14,053,124
28	str-198	ZK285.1	n/a	chrV 16,048,450	C. elegans STR-198 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
29	F58A3.4	F58A3.4	n/a	chrX 11,010,149	contains similarity to Pfam domain PF00635 MSP (Major sperm protein) domain contains similarity to Interpro domains IPR008962 (PapD-like), IPR000535 (Major sperm protein)
30	T04F3.4	T04F3.4	n/a	chrV 11,762,441	contains similarity to Pfam domain PF00036 EF hand contains similarity to Interpro domains IPR011992 (EF-Hand type), IPR002048 (Calcium-binding EF-hand)
31	B0379.1	B0379.1	n/a	chrI 10,076,345	contains similarity to Plasmodium falciparum ATP-dependent Clp protease proteolytic subunit, putative.; TR:Q8IL98
32	srxa-16	F44G3.5	n/a	chrV 16,113,637	C. elegans SRXA-16 protein; contains similarity to Interpro domains IPR017452 (GPCR, rhodopsin-like superfamily), IPR005047 (Protein of unknown function DUF286, G protein-coupled receptor-like putative Caenorhabditis species)
33	fbxa-166	C08E3.9	n/a	chrII 1,617,962	C. elegans FBXA-166 protein; contains similarity to Pfam domain PF01827 FTH domain contains similarity to Interpro domain IPR002900 (Protein of unknown function DUF38, Caenorhabditis species)
34	Y16B4A.2	Y16B4A.2	n/a	chrX 14,766,829	contains similarity to Pfam domain PF00450 Serine carboxypeptidase contains similarity to Interpro domain IPR001563 (Peptidase S10, serine carboxypeptidase)
35	sre-41	Y57A10B.5	n/a	chrII 12,388,981	C. elegans SRE-41 protein; contains similarity to Pfam domain PF03125 C. elegans Sre G protein-coupled chemoreceptor contains similarity to Interpro domain IPR004151 (C. elegans Sre G protein-coupled chemoreceptor)
36	Y43F8C.6	Y43F8C.6	n/a	chrV 19,636,948	contains similarity to Interpro domains IPR001412 (Aminoacyl-tRNA synthetase, class I, conserved site), IPR009057 (Homeodomain-like)
37	ZC482.7	ZC482.7	n/a	chrIII 12,752,251	contains similarity to Pfam domain PF01030 Receptor L domain contains similarity to Interpro domain IPR000494 (EGF receptor, L domain)
38	srj-38	T02B11.5	n/a	chrV 883,302	C. elegans SRJ-38 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
39	sru-11	Y45F10B.6	n/a	chrIV 13,586,085	C. elegans SRU-11 protein; contains similarity to Pfam domain PF02688 Domain of unknown function DUF215 contains similarity to Interpro domain IPR003839 (Protein of unknown function DUF215)
40	srw-65	Y38H6C.2	n/a	chrV 20,497,408	C. elegans SRW-65 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
41	srh-111	F08E10.6	n/a	chrV 17,484,578	C. elegans SRH-111 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
42	srw-73	T03E6.6	n/a	chrV 16,587,756	C. elegans SRW-73 protein; contains similarity to Interpro domain IPR017452 (GPCR, rhodopsin-like superfamily)
43	str-185	R08C7.7	n/a	chrIV 4,428,740	C. elegans STR-185 protein; contains similarity to Pfam domain PF01461 7TM chemoreceptor contains similarity to Interpro domain IPR003002 (7TM chemoreceptor, subfamily 1)
44	F23A7.3	F23A7.3	n/a	chrX 16,221,101	contains similarity to Schizosaccharomyces pombe Endocytosis protein end4 (SLA2 protein homolog).; SW:Q9P6L5
45	srt-54	K10B4.2	n/a	chrII 117,953	C. elegans SRT-54 protein; contains similarity to Pfam domain PF01748 Caenorhabditis serpentine receptor-like protein contains similarity to Interpro domain IPR002651 (Protein of unknown function DUF32)
46	F53E10.3	F53E10.3	n/a	chrV 2,606,470
47	ceh-24	F55B12.1	n/a	chrV 13,814,273	ceh-24 is orthologous to the human gene SIMILAR TO THYROID TRANSCRIPTION FACTOR 1 (TITF1; OMIM:600635), which when mutated leads to disease.
48	R11D1.2	R11D1.2	n/a	chrV 12,709,668	contains similarity to Pfam domain PF00646 F-box domain contains similarity to Interpro domain IPR001810 (Cyclin-like F-box)
49	srv-9	F53F1.8	n/a	chrV 13,422,059	C. elegans SRV-9 protein ;
50	Y57G11A.3	Y57G11A.3	n/a	chrIV 14,502,754	contains similarity to Pfam domain PF00412 LIM domain contains similarity to Interpro domain IPR001781 (Zinc finger, LIM-type)