Affine Alignment
 
Alignment between sdz-33 (top Y56A3A.14 300aa) and fbxb-66 (bottom Y40B1B.3 343aa) score 2489

006 FPILCLPDFVLQKSLKLMGVVEHLCLSILSKNIK-----------QLIATLKGYPKCFSF 054
    |||| ||   ||  |++|  +| +  | +||  |           +|   ||   +|   
004 FPILLLPQKSLQNVLRIMQPLELIYFSFVSKTCKAHTVDLNLKASRLTIVLKNGEECAWI 063

055 KFVPFTSLTVVGERFKHFSFRFDID-ESSQNAN------LRSYTDEGTY-----ITLTVP 102
    + | |     ||         |+|  ||  + +      | +| ++|+|      |+ ||
064 EAV-FKDGNTVG---------FEISTESCADCSEVMYPVLGTYYEDGSYDSSHADTIKVP 113

103 GFTVKHWIEHVAYVLCRNNSIKLVLWEPNI---DEVYEIVK--DMRTVEVVIVSSEIQSC 157
       +   | |   +  +    +  |+  |+   |++ ||+|  |   +|  | + +    
114 TIGLAQVIAHFQTIFHKPKISQ--LYHENVYICDQMLEIIKTLDFEKIEFWIRTFD---- 167

158 HLLKLFPSLRY---LGVYKAPISAQILTYNLLHLEVKTKVTLNDILISNCSNFSISGNDV 214
    + | || +        ++   +  +++    +     +   | ++| || + |  |   |
168 YFLILFSNYTREVDFQIHCLRLVTRVILCRSIRFVDSSDWHLPNVLASNGTQFKCS-TPV 226

215 SDKELNFFMRSWIKGSNPRLTKFYIRNSLRVRDPYLETVLFQNIDYI-ETHKKIYWRTFE 273
      | +| |+| |  ||||||    || |+    |+ |        || |  | |+++|  
227 PIKSINMFLRHWTNGSNPRLE--CIRISIEAEAPFSE-----ESTYIEEVLKGIHYQTEP 279

274 ISRPDGTKADVMWDPL 289
    |   |  |    +||+
280 I---DSVKT---FDPI 289