Affine Alignment
 
Alignment between dpy-4 (top Y41E3.2 289aa) and dpy-13 (bottom F30B5.1 302aa) score 19931

001 MDIDSKIKAYRFVGYAAVCFSAMAVLSVCITLPMVYNYVQHVRTQMHQELYACKGSAKDV 060
    ||||+|||||||| |+|| || +||||||||||+|||||  || |+| |   |||| |||
001 MDIDTKIKAYRFVAYSAVVFSVIAVLSVCITLPIVYNYVHTVRRQLHNEALTCKGSMKDV 060

061 WNSVYSIRELPLSANRTARS--------------TYNEQCAGCCLPGPQGPQGTPGKPGK 106
    |  |+ +| +  ++|||||+               ++  | ||| |||||  | |||||+
061 WADVHHLR-VDAASNRTARAVRYGRDDAAAGNGPNFDSGCEGCCQPGPQGAPGAPGKPGR 119

107 PGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGPKGP 166
    |||||||| || ||+ ||+|||  |||||+|||||||| || ||  || |  |+ |  | 
120 PGKPGAPGFPGNPGKAPQKPCEEITPPPCKPCPQGPPGAPGLPGDQGDKGEAGQPGQPGS 179

167 DAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPPGSN 226
    |||||| ||||| | || ||  ||||+ | ||  ||   | ||  |+ |  ||||| |  
180 DAAPGEQGPKGPNGAPGKPGAPGAPGDEGLPAVCEPVQKGEPGSTGEPGPVGPPGPSGQP 239

227 GIDGAPGAPGAKGEPGTPGEPGKDGEPGKPGTPGQDGTPGEKGICPKYCALDGGIFFEDG 286
    | || || || || ||  |+|| || ||+||  |  |||||+||||||||+|||||||||
240 GNDGTPGQPGPKGPPGPDGKPGADGNPGQPGPVGPPGTPGERGICPKYCAIDGGIFFEDG 299

287 TRR 289
    |||
300 TRR 302