Affine Alignment
 
Alignment between dpy-4 (top Y41E3.2 289aa) and col-125 (bottom C29F4.1 299aa) score 19874

001 MDIDSKIKAYRFVGYAAVCFSAMAVLSVCITLPMVYNYVQHVRTQMHQELYACKGSAKDV 060
    ||++ +||||||| |+|| || +||+|||+||||||||| ||+  || |+  |||||||+
001 MDLEQRIKAYRFVAYSAVAFSVVAVISVCVTLPMVYNYVHHVKRTMHSEINFCKGSAKDI 060

061 WNSVYSIRELPLSANRTARSTYNEQ-----------CAGCCLPGPQGPQGTPGKPGKPGK 109
    |+ |  ++ +| | |||||    +            |  |||||  || |||||||+|||
061 WSEVNQLKSIP-SGNRTARQAGYDAGVTGGAASAGGCDACCLPGAAGPAGTPGKPGRPGK 119

110 PGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPPGEQGPKGPDAA 169
    ||||| || ||||||||||| |||||+||| || | ||  |  || |  |  |  | |  
120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGQDGQ 179

170 PGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPPGSNGID 229
    || || ||| || | ||  ||||+||  | |||  || ||| | || || || ||  | |
180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGQPGAPGQPGHD 239

230 GAPGAPGAKGEPGTPGEPGKDGEPGKPGTPGQDGTPGEKGICPKYCALDGGIFFEDGTRR 289
    | ||||| ||  | || || || || ||  |  |  |||||||||||+|||+||||||||
240 GQPGAPGPKGPNGNPGAPGADGNPGAPGQAGTAGGAGEKGICPKYCAIDGGVFFEDGTRR 299