Affine Alignment
 
Alignment between srd-20 (top Y38A10A.1 339aa) and str-143 (bottom C09H5.4 336aa) score 2261

007 IWHWAWALLGCYLNVLLAYLAIFKSPKAIKSYATLIINFAATDFVECALDSFLQTRLMAV 066
    |  +|  ++|   |  | +|   ++ +   ||  ++  ||    |   ++ |+   +| +
011 IAQYAGFIVGQLTNSCLLFLIFTRAERLFGSYRHVMAVFALFSLVYTWIE-FIAQPVMHI 069

067 PGEAKLIYIFNGPCKYTGSLSCEVGFSFLLHCLTHSVWSLLIS-----FGYRFYILHNPA 121
      ++  | + + |  +  |   |+       ||  | ++| ||     | ||+  |  | 
070 K-QSMFIVMLDSPFTFDVSTGNEI------TCLYCSSFALCISLLAAQFYYRYIALCQPE 122

122 LS------RLTLLKISIMFYILSLVQALTYWTLFVPRKEIILHAKQWFPY-YDLETETGI 174
             |||| |  +   +  |  + +       |+  +    +  |  ||  |+ |
123 TLEKIKGWNLTLLFIPCIVCFVGCVTCVYFGMHNTVEKQKFMRDVMFENYDVDLGRESFI 182

175 LT-------GVIDLTNFLAVYAVAHSCLPFFPVYITIFFLRKRIIKYLSSQSQMMSPDTK 227
                 +  |    | +   |     + || +   +|   | |   +||  |+
183 AAFYWSYDKNGSRIFRFRDTIAASGCILVMVACFSTILYCAFKIYIRLKSAQALMSTKTR 242

228 AAHSQLLSALTAQAIIPMFLGIAVLLYFASQSGLFTSPILEYSI-------FAISILMPA 280
      + ||   || | + | |      + +     | + | ||  +        | + + ||
243 ELNRQLFITLTFQTLFPFF------MMYCPVGSLISFPFLEIEVGKFGNYTGAAAGIYPA 296

281 LSPITYLYFVRPYRRKV 297
    | |+  ++ ++ +||+|
297 LEPLIAIFCIKDFRREV 313