Affine Alignment
 
Alignment between srd-20 (top Y38A10A.1 339aa) and str-250 (bottom C06B3.10 341aa) score 2565

004 FFEIWHWAWALLGCYLNVLLAYLAIFKSPKAIKSYATLIINFAATDFVECALDSFLQTRL 063
    |  |+    |  |   | +|  | | |||| + ||  |+|  |  |     +|+ +  ++
003 FRSIFQHISAGFGVLCNFILIILIIKKSPKTLGSYKILMIYIAIFDIFYAVIDALIVPKM 062

064 MAVPGEAKLIYIFNG---PCKY---TGSLSCEVGFSFLLHCLTHSVWSLLISFGYRFYIL 117
     +    | +|   |    |  +      | |    + +     | |+  |   |  +|| 
063 FSYNSGAFIIVSTNEALLPKSWLLIANLLYCTFFGTSMAVFAVHFVYRYLTVIG-SYYIK 121

118 HNPALSRLTLLKISIMFYILSLVQALTYWTLFVPRKEIILHAKQWFPYYDLETE---TGI 174
    +      +||+   ++| ++     +|++||    +      | ++  ++  ++    | 
122 NYDRQIIITLMTFPVIFGLVWF--WMTHFTLTASDETEQFFNKYYYGVHNSASDIFYVGY 179

175 LTGVIDLTNFLAVYAVAHSCLPFFPVYIT------IFFLRKRIIKYLSSQSQMMSPDTK- 227
         |     |+++ +     |   +||      ++|  |  +   |  |+ ++  ++ 
180 YFYPEDAYGNKALHSRSFRGFLFQSTFITSSFGLILYFGTKCHLHTKSLSSKTVTSSSRF 239

228 AAHSQLLSALTAQAIIPMFL-----GIAVLLYFASQSGLFTSPILEYSIFAISILMPALS 282
    +  |||  ||  | |||+||      |++   | + |  | | ||  +|     | ||| 
240 SLQSQLFYALVFQTIIPVFLMHIPSTISMCAAFTNISIEFISQILSCTI----SLYPALD 295

283 PITYLYFVRPYRRKVKSIIRNPFKILS 309
    |+   + ++ ||  +   + +  ++|+
296 PLPNFFIIKSYRNAITQYLTDFLRLLT 322