Affine Alignment
 
Alignment between ssq-2 (top T28H11.5 405aa) and ssq-1 (bottom K07F5.11 290aa) score 24605

001 MTSAYFGVAGGSNTGAQSAYFGVGGGPAGGGGGASKVGGGAAPPPGTSVYMGAG-GGGGG 059
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||
001 MTSAYFGVAGGSNTGAQSAYFGVGGGPAGGGGGASKVGGAGAPPPGTSVYMGAGAGGGGG 060

060 GGAQSAYFAVGGAPVGGAPAAVSIGAPPPAGGGGASTMTALGGAPSGASTMTAVGGAPRG 119
    |||||||||||||||||||||| +|||||| |||||||||||||||||||||||||||||
061 GGAQSAYFAVGGAPVGGAPAAVPMGAPPPA-GGGASTMTALGGAPSGASTMTAVGGAPRG 119

120 ASTMTAVGGVPSGASTMTAVGGAPTGASTMTAVGGAPTGASPMTAFGGAPTGASTMTAVG 179
    |||||||                                                     
120 ASTMTAV----------------------------------------------------- 126

180 GAPTGASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGVPTGAST 239
                                                                
127 ------------------------------------------------------------ 126

240 MTAIGGAPSGASTMTAVGGAPRGASTMTAVGGAPTGASTMTAVGAAPGGASTMTAVGGAP 299
        ||||+||||||||||||||||||||||||||||||||||| ||| |||||||||||
127 ----GGAPTGASTMTAVGGAPRGASTMTAVGGAPTGASTMTAVGGAPGEASTMTAVGGAP 182

300 RGASTMTAVGAPGGGASALGAAPPAGSMS--GGGGGATSGYFGVGQGVMGGGGAVGQSAY 357
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
183 RGASTMTAVGAPGGGASALGAAPPAGSMSGGGGGGGATSGYFGVGQGVMGGGGAVGQSAY 242

358 FGVGGGAAGGAKTGGGGGGGIPGQSMYMGAGGGGGAGGGATSAYFAPK 405
    ||||||||||||+|||||||||||||||||||||||||||||||||||
243 FGVGGGAAGGAKSGGGGGGGIPGQSMYMGAGGGGGAGGGATSAYFAPK 290