Affine Alignment
 
Alignment between ssq-4 (top T28H11.1 373aa) and ssq-2 (bottom T28H11.5 405aa) score 25498

001 MTSAYFGVAGGGNAGAQSAYFGVGGGPAGGGGGNKSAGGGGAPPPGVSCYLGAGAGGAAS 060
    ||||||||||| | |||||||||||||||||||    ||| ||||| | |+||| ||   
001 MTSAYFGVAGGSNTGAQSAYFGVGGGPAGGGGGASKVGGGAAPPPGTSVYMGAGGGGGGG 060

061 GSQSAYFGVGGGPVGGGGGGGAPPAASNDAGYFATPPAAPAGGSSTMTAVGGAPRGASTM 120
    |+||||| ||| ||     |||| | |        || |  ||+|||||+|||| |||||
061 GAQSAYFAVGGAPV-----GGAPAAVS-----IGAPPPAGGGGASTMTALGGAPSGASTM 110

121 TAVGGAPVGGSSTMTAVGGAPSGASTMTAIGGAPRGASTMTAVGGAPMG----------- 169
    |||||||  |+|||||||| |||||||||+|||| |||||||||||| |           
111 TAVGGAP-RGASTMTAVGGVPSGASTMTAVGGAPTGASTMTAVGGAPTGASPMTAFGGAP 169

170 -GGSTMTAVGGAPSGASTMTAVGGAPSGASTMTAIGGAPRGASTMTAVGGAPMG------ 222
     | ||||||||||+||||||||||||+|||||||+|||| |||||||||||| |      
170 TGASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGAPTGASTMTA 229

223 ------GSSTMTAVGGAPIGGSSTMTAVGGAPRGASTMTAVGGAPGGASTMTAMGGGP-- 274
          |+|||||+||||  |+||||||||||||||||||||||| |||||||+|  |  
230 VGGVPTGASTMTAIGGAP-SGASTMTAVGGAPRGASTMTAVGGAPTGASTMTAVGAAPGG 288

275 ----SAFGGAP-----------PPPSGSAMG--------GGGGGGATSAYFGVGSGAMGG 311
        +| ||||           |    ||+|         |||||||| ||||| | |||
289 ASTMTAVGGAPRGASTMTAVGAPGGGASALGAAPPAGSMSGGGGGATSGYFGVGQGVMGG 348

312 GGAGAQSAYFGVGGGPVGGGGGGAKSGGGGGGIPGQSVYMGAGGGGGGGGGGGATSAYFA 371
    |||  ||||||||||  ||   |   |||||||||||+||||  ||||| ||||||||||
349 GGAVGQSAYFGVGGGAAGGAKTG---GGGGGGIPGQSMYMGA--GGGGGAGGGATSAYFA 403

372 PR 373
    |+
404 PK 405