Affine Alignment
 
Alignment between srj-8 (top T28A11.9 344aa) and srj-6 (bottom F31F4.8 331aa) score 17480

001 MIYISWYHQNFPRIFGVFSYIINPIFIYLALTKSKTQMGNYRFLLVAFAVFDLFYSTNEF 060
    |||++|||+  | |||| |||+||+|||| ||||   || |||||+ |||||+|||  | 
001 MIYLNWYHKYLPIIFGVLSYIVNPLFIYLVLTKSSKHMGKYRFLLIGFAVFDIFYSIAEM 060

061 LTPLAVTGNSHGFVVFLTEGPFFEHPELGAHAISNRCGFISLSYALLIIHFVYRYIALFH 120
    |||+||    +||  |+|+| | |+     +|||+|| ||++|||||||||||||  |||
061 LTPIAVINTGYGFATFITDGFFTENAN---YAISSRCTFIAISYALLIIHFVYRYFILFH 117

121 PELHRNFFHPIGVLIYALFLLIHGASWSVICQQCLGGTDEIRELIRDEFMAEYHADTRDV 180
    | |      |+||         |||||+ +|  ||   +|||+++|  |   +| ++ ++
118 PHLVDKMLQPLGVFAMIALTAAHGASWTWLCDWCLAPNEEIRDIVRPAFKEVHHVNSDNI 177

181 PMLAALYWNASDAIRFRSWLGIVLLTVISFYAMTIYFVLGYKIMRKIRSMQANSSMSKNS 240
     +|   | |||+ + ++|| ||+ ||+ | | |++| |||||||+|   |  |++||  |
178 SLLTGQYRNASNFVVYKSWFGILSLTLFSCYCMSVYLVLGYKIMKK---MNQNTNMSTIS 234

241 IRLQKKLFLTLIIQTCIPIFASFLPTVLSWYAPIFGIDLSWWNTNVATVALSAFPFIDPL 300
      | ++||  |+ |||||+||||||||++||||+| |+++|||  +  ||||||| |||+
235 ATLNRQLFKALVAQTCIPMFASFLPTVIAWYAPMFLINVTWWNNYICNVALSAFPLIDPV 294

301 AVIYLVPSYRNAIL---RKRDPTVASSS 325
     ||| +|+|+| +|   | + ||| ++|
295 VVIYFIPNYKNTLLVWFRLKKPTVTATS 322