Affine Alignment
 
Alignment between srj-11 (top T28A11.12 338aa) and srj-10 (bottom F14H3.1 335aa) score 22002

001 MYIHWSHHYLPKLFGILSFVCNPIFICLIATEKKASIGKYRYLLIGFAIFDMAYSTVELI 060
    |||||+|+||||+||+|||+ || || ||  |   ++| |||||+ || ||+ |+ ||| 
001 MYIHWTHYYLPKVFGVLSFILNPFFIWLILNENITALGSYRYLLVTFASFDIIYTLVELA 060

061 VPVAIHGTGAAFVIYLADGPFFGTGKLGQLAVSIRCGCISLSYGILVIHFIYRYLVLFNT 120
    ||++| |||||| ++++ |||+||||||| |+|+||| ||||||||||||+||| |   |
061 VPMSIFGTGAAFAVFVSGGPFYGTGKLGQFALSVRCGFISLSYGILVIHFVYRYSVF--T 118

121 RIIDRLLRPSGLFGLFVFFVFHGIAWSSVCEMCLYGDQEVFDYIYDAFQKDYHVDSHDLS 180
    +|  + |    | |||+| + ||| ||||||+ |||||+| ||||  | |||||||| | 
119 QISHQKLGFWALLGLFIFLISHGIVWSSVCELLLYGDQKVADYIYKQFMKDYHVDSHGLF 178

181 MLMALFFDASPEIKRRSWIGILLLTGISIYAISLYVILGWKIMKKLA-DNPGVSATTQKL 239
     || ||+| | || |||| |||+|||+| ||  || || |||++||| ||||||  ||||
179 FLMGLFYDGSSEIVRRSWGGILILTGVSFYAAPLYFILAWKIVRKLANDNPGVSVITQKL 238

240 HRQLFKALAVQTFIPICISFSPCMMAWYGPVIGLDLGMWNNYLGVIALSAFPVLDPLAII 299
    +| ||||| ||| ||||| | |||+|||||  |++ | |+ ||| +| |||| |||||||
239 NRHLFKALVVQTLIPICICFFPCMVAWYGPAFGVNFGNWSRYLGAVAFSAFPDLDPLAII 298

300 FLLPNYRNKLFRTVKMPIKYFYSGTSTVRPNV 331
     ||| ||||||   | || + +||||||||||
299 LLLPYYRNKLFGIAKKPITFLHSGTSTVRPNV 330