Affine Alignment
 
Alignment between sre-40 (top T05A7.8 363aa) and sre-13 (bottom C38C6.4 359aa) score 2147

004 LVNNSTETYFFPIFLMNYKRDMGPFAILMLTVEMLCFMLGIILTIRGCMVISETRVFNRN 063
    ++  |   | |  ++           | ++ + +  ++| + + |+ |   + |+  +  
025 IIEGSYNYYLFVFYIQ----------IALIFIVLFYYLLNVYIDIKTCQFSTNTQKIHHA 074

064 LNYILCTILLQFFENVIGRLLIMPYQKGWILL----PGNDHTKIYSEFTTNTTSEMIIIE 119
    + |+ |         |+| ++ +  ||  |||    |  |         ||     | + 
075 I-YLPC---------VLGHVMCL-IQK--ILLIKDSPAGDD-------MTNPVFYYISLF 114

120 KTLWDVPYLFIGSVMLTHYMAFSVTCMIGITFERSLATYWINDYEKKDRP---GVYIFAI 176
    + ++  |  +               |+     ||  |||++|||||  |    |+ ++ |
115 RAIFCFPGFY---------------CLSAFVAERWFATYFLNDYEKNQRTWLVGLILWII 159

177 VFIQTFTALVAYSAWNLWLSVYIWLLTGILLLIVNFGLFGYIWYWNIRVHR--IHDNSIM 234
      |   +||  ++| +  + | |++|   |  + |        | |  ++|   + ++  
160 YSIAFISALDFHTAPSTVIHVTIFILLSCLAYLSN--------YLNFLLNRSYYYKSNRS 211

235 TQSKYTLQARFQARENAR-GLEFTRLAVIVI------TMALLFECTIFVLQYYNFFQEY- 286
        |+|  |||  +| |    | |||+ +        | || +       + |      
212 DGGGYSLAQRFQISDNIRFSFFFNRLALSIAFFQISGPMCLLIDNLNISRSWKNLNTVVF 271

287 -EIFLYYAIDWVNAGNTVAIVPLTV-ALEPVWR---RKFFGNIRHSCPKTSKSSAI-VDV 340
      | | |||          + |  +    | +|   +|   +||+   +|+|+  + +| 
272 DTILLLYAI----------VTPFVIYHHNPKYRTELQKIANSIRNIRVRTNKNQIMPMDS 321

341 IKGS-----------KT----TDVDTEEYFSQLSKAWA 363
    +  |           ||        |  || +| +||+
322 LDESFNSLRIQDTFGKTIVFNVTEQTSTYFEKLDRAWS 359