Affine Alignment
 
Alignment between nhr-125 (top R02D1.1 399aa) and nhr-250 (bottom ZK488.1 358aa) score 9234

013 CRICN-QKAHGNHFGVLTCRACASFFRRAAFSKWSQLKCQKGGCSRNFCKRCRLKKCREM 071
    | +|    |||||||  +|||||+|||||| ||||  |||   ||               
051 CEVCGAHGAHGNHFGATSCRACAAFFRRAANSKWSFQKCQTQNCSDLLLP---------- 100

072 GMDTTKFQYNRDSFRATGQFQLPPPRSLASFVGRPELFLFCDTEAPNAKMLIDVRYLLEE 131
        | +++     | |  | |   |                ||    |+          
101 --SETVYKFESSLHRLT--FGLTKSR----------------TEDYKTKI---------- 130

132 AGRIINQGYETPASGKNQLE-NLTEGF-KYIKVDMNNISSSKYASKDAIISMWEYYFFTV 189
              |   || |+   ++| | |++        + +| |           ||  
131 ----------TGTLGKLQIVLVVSEAFWKFL--------NKRYKSAQ--------IFFA- 163

190 TRWLMYFEGFQKLNSHTQITLIQSVWNVWSRLHKYVATVDYHKANPDTLPTNVVI-HNTL 248
         +|  |       |+ +++ +|++|+ | ++ ||  | |+ |+  || +|     |
164 -----FFPNF-------QLKILECIWHIWATLDRHSATAVYRKSYPNAAPTQIVSRRGVL 211

249 VDIENVEFDSTWLSDYPVEHVRRYLSVQHCREFDILGTLRKLNPSELEITYLFAQICFEH 308
    +|+    |||||+||||  ++  +|       |||+| |+ | |+++|+|++ ||+ ||+
212 MDLAKTNFDSTWISDYPAVNIVYFLRQSSRDNFDIIGYLQDLQPTDMEMTFMLAQLSFEY 271

309 AGKRNQGDIMKVTEQFLDSLANDLHDYYVNEMNNSRYFLRLTQLLKINQAIQFSDISPQK 368
    |||| ||||+|+||+|   ||||||||||+ +|  +|| || +|+||| +|       ||
272 AGKRCQGDILKITEKFQQILANDLHDYYVDVLNMPKYFDRLAKLMKINNSI-------QK 324

369 QIRNNIIKKEAEKLEKLQKSQFS 391
     +  +  | |  |+ |+ | +||
325 NLWEHRPKMEVAKVFKIMKIEFS 347