Affine Alignment
 
Alignment between srd-3 (top K10B4.5 344aa) and str-1 (bottom C42D4.5 345aa) score 1995

029 LGILFNTLLIILISTKTPKLLQSYSMLHLNFALCDLFSCLAGMLALQKIVFSGWSLTYIF 088
    |  | +  | +||  |+|    +|  |    ++ +|   +  +|   ++     +   + 
018 LAFLIHFPLTLLILYKSPSSFGAYKYLLTYISIFELVYAVLDVLVSPQLYTHKSAFMLVL 077

089 HGACGQISSYFCYFLHVFVCHCLAHSQWILMISFLYRYYILDQISPDTVKIVRIC-ILTY 147
          +  +  | + +  |  |  |  |  |+|+||| ++     + +|      +  +
078 DSNKTFLPFWTLYPIDLLFCGMLGCSMAIFTINFIYRYLVMK--GSELLKSFESSKLFIW 135

148 LPSLLFVIVYWSDV------ANEDALKRIVNSFHPEYIYDSKEIWGDLVIAG-------N 194
    + | +     |  +       | |  | + ++|    +   |    ++|  |        
136 IASPMVYSAIWMFITEMTLQGNPDTDKLLEDTF----LKKQKISLSEVVYIGPNYYPEEG 191

195 MSCWSAATFSAIVYMTIPCF-PIYGVIVFFRHKTLKSLDGRGRITM----SETTRSSHKQ 249
    +  |       ++ +|+  |  +| +| |     + |     ++ +    |+  +++  +
192 VIDW--IPIIGMISLTLMIFVSVYSIIYF----AVNSYVAMNKLVLTSVNSQRYKANQTE 245

250 LIKALTIQAIVP--IFWLTASTFYLLALFQVVGRVIVENMPFRIMECMPMITPLISLYFV 307
    |+ || ||||+|  +    ||  ++   |    +         +    |++ || +++ |
246 LLNALVIQAIIPFALMHFPASIVFITPFFNCGNQTFARIFSVTV-ALYPVLDPLPTIFVV 304

308 RPYRSALTGW---FFPTSLLKPVIASAMLSSTA 337
    + || |+  +    |     +| | +   |||+
305 KCYRKAVIKYLNILFSFCSNQPTIVTEQHSSTS 337