Affine Alignment
 
Alignment between ssq-1 (top K07F5.11 290aa) and ssq-2 (bottom T28H11.5 405aa) score 24605

001 MTSAYFGVAGGSNTGAQSAYFGVGGGPAGGGGGASKVGGAGAPPPGTSVYMGAGAGGGGG 060
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||
001 MTSAYFGVAGGSNTGAQSAYFGVGGGPAGGGGGASKVGGGAAPPPGTSVYMGAG-GGGGG 059

061 GGAQSAYFAVGGAPVGGAPAAVPMGAPPPA-GGGASTMTALGGAPSGASTMTAVGGAPRG 119
    |||||||||||||||||||||| +|||||| |||||||||||||||||||||||||||||
060 GGAQSAYFAVGGAPVGGAPAAVSIGAPPPAGGGGASTMTALGGAPSGASTMTAVGGAPRG 119

120 ASTMTAV----------------------------------------------------- 126
    |||||||                                                     
120 ASTMTAVGGVPSGASTMTAVGGAPTGASTMTAVGGAPTGASPMTAFGGAPTGASTMTAVG 179

127 ------------------------------------------------------------ 126
                                                                
180 GAPTGASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGVPTGAST 239

127 ----GGAPTGASTMTAVGGAPRGASTMTAVGGAPTGASTMTAVGGAPGEASTMTAVGGAP 182
        ||||+||||||||||||||||||||||||||||||||||| ||| |||||||||||
240 MTAIGGAPSGASTMTAVGGAPRGASTMTAVGGAPTGASTMTAVGAAPGGASTMTAVGGAP 299

183 RGASTMTAVGAPGGGASALGAAPPAGSMSGGGGGGGATSGYFGVGQGVMGGGGAVGQSAY 242
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
300 RGASTMTAVGAPGGGASALGAAPPAGSMS--GGGGGATSGYFGVGQGVMGGGGAVGQSAY 357

243 FGVGGGAAGGAKSGGGGGGGIPGQSMYMGAGGGGGAGGGATSAYFAPK 290
    ||||||||||||+|||||||||||||||||||||||||||||||||||
358 FGVGGGAAGGAKTGGGGGGGIPGQSMYMGAGGGGGAGGGATSAYFAPK 405