Affine Alignment
 
Alignment between F55A12.1 (top F55A12.1 892aa) and prg-1 (bottom D2030.6 824aa) score 4161

251 LYPGLKKAIQFIEGPYGRGQNNPSVVI--DGMKAAFHKEQTVIQKLYEITGQDPSNGINN 308
    + || + ||+  |  +     |   ++  + |   ||||    |              ||
189 ILPGYETAIRMYEENFMLCVENRFKMVREESMYILFHKELRSCQ--------------NN 234

309 MAR--EKAAAVMKGLDCYSTYTNR-KRHLRIEGIFHESASKTRFELPDGKTCSIAEYYAD 365
      |  ||   +  |    + | |+  |+ |++     | |     + ||++ ++ ||+ +
235 PQRVQEKMNEMYGGTTIITRYNNKLHRYTRLD----YSISPLSEFVKDGQSITLKEYFKN 290

366 KYKITLQYPNANLVVCKDRGNNNYFPAELMTISRNQRVTIPQQTGNQSQ---KTTKECA- 421
    +| | +   +  +++ + +      | ++  |     +  |    ++ +   |  || | 
291 QYGIEITVDDQPIIISEGKPKQPGEPPQVSYIV--PELCFPTGLTDEMRKDFKMMKEIAK 348

422 -VLPDVRQRIIITGKNAVNISLENELLVAL---GIKVYSEPLMVEARELDGKELVYQRSV 477
          +||++ + |  |++|   +++      || +  +   |+|| |  + |  +++ 
349 HTRMSPQQRLVESRKLIVDLSKNEKVMECFKYWGISLGQDLANVQARVLKSEPLQGKKTY 408

478 MSEMGKW-RAPPGWFVKPAKVPELWALY--AVGNQG----------------CRFSSGDP 518
      +  +| |      +        | +     || |                 +   |+|
409 EGKQAEWARGVKECGIYRGSNMTNWIVIGPGSGNSGLLSQKFIEEARRLGKILQVQLGEP 468

519 PCE--TGLFHTD---KIMDQLEKVAASGC-KYVLVITDDAITHLHKRYKALEQKSRMTIQ 572
     |    |+   |    +   +++|        |+++ ||  |      | |  +  +  |
469 MCVPIRGISPNDYLEGVKGAIKQVDGEDIHMLVVMLADDNKTRYDSLKKFLCVECPIPNQ 528

573 DMKISKANAVVKD-GKRLTLENIINKTNL----KLGGLNYTVS-----------DSKKSM 616
     + +       || |+   | +|+ |  |    | ||  + |+           |     
529 CVNLRTLAGKSKDGGENKNLGSIVLKIVLQMICKTGGALWKVNIPLKNTMIVGYDLYHDS 588

617 TDEQLIIGVGVSAPPAG-TKFMMDNKGHLNPQIIGFASNAVANHEFVGDFVLAPSTQDTM 675
    | +   +|  ||      |+|    + | ||  +|   | + +      ||     |   
589 TLKGKTVGACVSTTSNDFTQFYSQTRPHENPTQLG---NNLTH------FVRKALKQ--- 636

676 ASIEDVLQNSIDLFESSRKTLPKRIIIYRSGASEGSHASILAYEIPLAR----------- 724
                 ++|+ +||| |+|+|| || +|    |   |+ | |           
637 ------------YYDSNDQTLPSRLILYRDGAGDGQIPYIKNTEVKLVRDACDAVTDKAA 684

725 AIIHGYSKDIKLIYIVVTKEHNYRFFRDQLRSGGKATEMNIPPGIVLDNAVTNPACKQFF 784
     + +   + ||| +|+|||  | |  +   +       +|  || |+|  || |    |+
685 ELSNKVQEKIKLAFIIVTKRVNMRILK---QGSSLDNAINPQPGTVVDTTVTRPERMDFY 741

785 LNGHTTLQGTAKTPLYTVLADDCAAPMDRLEELTFTLCHYHQIVALSTSIPTPLYVANEY 844
    |      |||     | ++ ||     |+ ++| | ||| +     +  +| |   |++ 
742 LVPQFVNQGTVTPVSYNIIHDDTDLGPDKHQQLAFKLCHLYYNWQGTVRVPAPCQYAHKL 801

845 A 845
    |
802 A 802