Affine Alignment
 
Alignment between F53C3.4 (top F53C3.4 224aa) and F53C3.3 (bottom F53C3.3 239aa) score 13034

001 MSRLIWSFLLICSLLSKCLDARAFGGFG--------------------------DNRNFR 034
    ||||||||||||||||+ +|||  || |                           + +||
001 MSRLIWSFLLICSLLSRSIDARGGGGRGGGGGGARGGVGGRGGGGSFRSGGARSSSSSFR 060

035 GGGRRYIASFRQNLFHIRSTAKLFSYSPITRTHVIISPASPIIYGDYHYYWEGHHVYTTQ 094
    ||   | +|||||+||  |||| |+|||+||||+|||||||+|||+||||| |||| ||+
061 GGSSHYSSSFRQNVFHTSSTAKTFAYSPMTRTHLIISPASPMIYGNYHYYWAGHHVNTTE 120

095 KPDKCDYQIIDKDKELRNITFANGTRPAIITFGCAEYTYCCGLECCTGLSQLEEGLFLIG 154
    || |||||| |+| ||||+||||||||| ||||||||  |||+||||||| ||  + |||
121 KPYKCDYQISDEDMELRNVTFANGTRPANITFGCAEYQICCGMECCTGLSDLEGFMVLIG 180

155 VSLAVLFLAVITVLLDK---CKKRTTKRFN-LPRSTPEVQELTPSAPNATNKVTTLFKK 209
      |      ++ + +||   |+  ||   |  ||| || ||||| | |||++||  +||
181 AILVAFPFGLLIIWMDKKGYCQGDTTITGNERPRSAPEFQELTPRASNATHQVTNSYKK 239