Affine Alignment
 
Alignment between sre-22 (top F36D1.2 359aa) and sre-4 (bottom T13F2.5 368aa) score 2945

019 VQAVLFLLSFVCTVVGVKIALKFTIFHKNQRNIFIALLLLWFELLICRILLWAFKYSLAI 078
    ++ || | |++   |   +    + +| |   +   |+  +|  + ||+    |+| +  
044 LETVLLLWSYLECGVFFFVLCTNSQYHPNLTWLLKNLVAQYFFSMACRLFQIYFQYGI-- 101

079 EISKAIDCDDECHHLGRCSFEKNKFDPIFISAIMRYHYMFFVLATPVGILVERIFATVFV 138
            |||       |  |+ +  ||++   |   +|  |     +++||++|++ +
102 --------DDE-------SGLKSNWFFIFVT-FSRNCLIFTALYFSPFVMMERLYASIHI 145

139 KDYEKESRYWIFGLIFFSQNMFACTMSVFTTTMGATFHFIIL------TILGSLSGSA-V 191
     ||| + |++    + ++ ++|   + +++  +| |+ | |+      + | |++  | |
146 GDYENKPRHY----VGYTLSLF---LYLWSLMIGLTYAFEIIPTYIHVSCLVSINLLAFV 198

192 IYALVEYFNQRR-LTKLENEHRTTNYTLSIRYQLKENLKTLKLMRQFFISIIVIIIAMGL 250
    |  | | +| ++ + |  +  ++  |+|| |||+ |||||  | ++  ||||+  +  |+
199 ICLLNERYNSKKFVQKKFSTRKSVTYSLSERYQIVENLKTAYLFKRGIISIILFSVICGV 258

251 ANYLPILLKLDED 263
          |+++  |
259 -----FLIRMSSD 266