Affine Alignment
 
Alignment between srj-5 (top F31F4.16 331aa) and srd-5 (bottom T19E7.5 326aa) score 1919

021 IVNPLFIYLVLTKSSKQMGKYRFLLIGFAVFD-----VFYSIAEMLTPI--AVINTGYGF 073
    ++| +  ++   ||   +  |  + + ||+ +     | + +   + ||   +|   || 
018 VLNSMLCHVAAWKSPTVIKTYSIITVNFAITNLTICGVNFILQMRMVPIEKTMIFVSYGP 077

074 VTFITDGPFSENANYAVSSRCTFISMSYALLIIHFVYRYLILFYPHQVDKMLQPFGILAM 133
      ++||           |      + +  ||+| | ||| ++       + ++    | +
078 CQWLTD----RTCFNLYSVLVHVYTHTIWLLLISFCYRYYVMIRSEPSKRQVE----LLL 129

134 IVLTAGHGASWTWLCEGCLSP--NEEIRDMIRPAFLEIHHVNSDNISLLTGQYRNASDFV 191
    +++          |      |    +|+  + | +      |  ++ +        +|  
130 LIIYLPSFIQMILLFFDFTDPLILLDIQQNLVPQY------NFTDLMIF-----GVADST 178

192 VYKSLFGIMSLTLFSSYCMCVYIILGYKIMKKMN-ENTNMSSISATLNRQLFKALVAQTC 250
     + +++ |+ + + |+  +   ++|  ||++||  +   +++ + +|  || +||  |  
179 SFNAMYSIVHVAVMSTPIVLCIVVLRKKILRKMEFKGVQVNANTRSLQLQLLRALTFQAV 238

251 IPMFASFLPTVIAWYAPMFLINVTWWNNYICNVALAAFPLIDPAVVIYFIPNYKNTLLVW 310
    || |  +|  | +++     |    +  |+   |    |++ |     |+  |+     |
239 IPGF--YLIGVASYFVSRLEIYRDPFFEYLIFSAFLFVPVLTPISSFIFVTPYRK----W 292

311 F 311
    |
293 F 293