Affine Alignment
 
Alignment between cdh-4 (top F25F2.2 4307aa) and cdh-8 (bottom F18F11.3 1673aa) score 10032

0602 NKHSPVFSSFPEIVEVTEDAPIGTVVAKLQANDEDTGYNGFIRYVIHDIAGSSHEVLTVD 0661
     | +|| ||+ |   |++|+| ||| + |+   | ||| +|  |+ +     ||  +    
0128 NDNSPQFSNTPSSFEISENAEIGTDIFKVTTLDPDTGISGISRFSVE--GDSSFTLAKRK 0185

0662 EQSGEITVASDLSKLMKEKLEVLDVQVHYIKHVTSNISNFQLKVSAIDAGTP----VKSS 0717
       ||+ +    |+|    ||+  +  +|     | ||       +| | | |      + 
0186 CSSGKCSTQLRLAK----KLDFEEKPIH-----TFNI-------TAKD-GDPHSNRTHTV 0228

0718 VKTMKLRIKDVNNHSPQF-DEVSYYLRISENEKPGKDIFKVTANDFDGGNNGKIKFSLGN 0776
       |+ + +|+ |+  |+|  + |    | ++ |||  | |+ | | +  |  +|+| +  
0229 AHTVTIHVKNENDEPPKFLTDFSQVFPIFKSTKPGDIIAKLEAIDVE--NGAEIQFGMKE 0286

0777 NQEKSSVISIDAKTGIVKLLKSLDREDQ--DVHTFAIIASD---EGFPMRVSVTNLTISV 0831
     |+     + ||+|+| | ||| |  +|    |  +|  + +   +   |++ + |   ++
0287 NEH----LKIDSKSGNV-LLKKLPTDDALITVELYATSSKNGKSKTVEMKLRLMNDEATL 0341

0832 EDVNDN---PPKCVVQHSRARIPEDLPHGAFVSCMAAFDEDIGQNSKLKFLLNSEKVPFR 0888
       + +|   |  |      | + +    | | + +           | + +  ||     
0342 PKIAENQEKPELCEFPIYEAHLIQGT--GTFSTPLKIKTLKSMAEEKPRLIGGSESFDLN 0399

0889 I--DHHSGCIFIHAPEYPLDYHKTPFFNLSIEVADHGDPIL-STSCHLHVELVDIAHNHL 0945
     +  | |     ++| +            ++ +| |    ++ | |    + |   |   +
0400 VIDDFHVELKVLNAEK------------VASQVLDSAQLLVKSQSGQCRIVLRSAA--QM 0445

0946 AIEFDDVAKEASV---YENSEIGTEVIMIEAKETGDEQKVKAEN-LEYRIIGGDGWPHFS 1001
       +   +|++  +   +| ||   +|+         | || ++  + | |+| +|   | 
0446 TPKASPIAQKLKIIPKFEKSEYQFQVVENREPTVLGEVKVISDGPVTYEILGENG-EKFQ 0504

1002 IDQKGTVRTTHLLDRETKSAYWITVEARDSKTDLYKDPRRRDVLHVFIRILDRNDHRPVA 1061
     |   | ++    +||||   + + |+| |      |         + | + | ||+ |+ 
0505 ISNDGEIQNLEPIDRETYEKFELIVKATDLNGSSGKS-------QLIIHVKDENDNSPIF 0557

1062 KKPMYIASVAENSPANVVIVKVEATDADDVDNDAAAPLMFKIERGDPQSFFRIDLT-SGY 1120
      |  |  +| |        +|+ |||||   |     +++ |++        ||++  | 
0558 DKEHYFITVDEGKSEK---LKITATDADSGKN---GQIVYSIDQKIDN--LPIDISPDGM 0609

1121 ITTSGIRRLDREKQSEHELWVSICDGGEPQLCSNVIV-----------IVNVLDENDNSP 1169
     +    | | +    +|  | |+  | |||+  ++  |           | ++ | |||||
0610 LFIGAIDRENMGNSNEVNLTVTASDSGEPKRSASATVTIRVKQRYSTSITHLQDINDNSP 0669

1170 TFTQAIHHYSVRSKFA--GKLCRIFAVDADE-GENARLTYNITEGDARFSIDNNGNII-- 1224
      |+ + +   + +  +  | + |+ | |||    |  +||  | || +|++ ++| |+  
0670 VFSNSRYSIPLDANISPGGIIGRLEATDADSTSPNNYVTY--TSGDPKFTVSDSGEILFT 0727

1225 ASEAIHGDESYALTVQATDHGTPGQQFAATRVVLTANS--AGQKPRKSKNSPPEISGKKS 1282
         +    |    | | | | |     |  |+    |  + +    ++ +  +  |+||
0728 GPGTLEKSASLEFNVTAQDGGDPMNSANALVVINEHRSMKSIENELTTQINSNDTGGEKS 0787

1283 DYVIPISDADQVGLTVGKLEASDADGDELWWSISSGDPDSVFDVRQDTGQLLLAKKVELL 1342
     +  |   +|   | |   + || |||       |  +  +   +   +|++   |||+  
0788 E--IKWLNAGMPGYTYEIIRAS-ADG------FSDSEVATWISIDSKSGRIYTLKKVDPS 0838

1343 KRGELRLNISVTDGQAWDHSTVIIQVSRQISQRPKFSASHYQTDVSERVAVGTQIYTLKA 1402
     +  +++|+||+  |+      +|| |       | +|    +  |+|   +|| +  +  
0839 RVKQIKLHISMRKGKREVPVELIINVMDTDDVTPIYSTPTRKLSVTESATLGTTVVDMPV 0898

1403 SGESLGTKPLVFNLFSVDDVAMEDKIRVEPSSGNVIVMEPLDYEAARRIRAVVQ--VQQA 1460
      |       + ++|          |++++   | + +++ ||+|  + |+ +|+  | + 
0899 EGIK-EQNEIKYSLKITS--GPRGKLQID-RYGTIKIIKSLDFETEQIIKGIVEGMVVKN 0954

1461 NMKSFATFSVNINDENDNSPYFVGHTAFAF-VDESDTVDDVLATVTAFDKDRGENGIVTY 1519
        + ++| + | | ||| | |   + ||  + ||  +  ||        ||  +   | 
0955 GKAAKSSFILTILDANDNRPIFKNSSNFAVSLLESSVLGTVLDLPYPLATDRDSSKFSTL 1014

1520 SIVSGNEESLFKIDAKSGEVRLAKPLDPELQHVESILRIRAIDSAANSLKDEMSLHIR-- 1577
           +|  ||||  +  +||  ||| | | | | | |+ +|+       |+   +   
1015 KYSMTGDEGYFKIDESNSTIRLVAPLDFETQRVHS-LSIKCVDNQGREPHHEVFASVTVT 1073

1578 ----NSNEAPETAKFDRKVYQTTLYDSTRPGTPVLVL---NALHHGTVSYKLEPNCTFFE 1630
         | | ||     |  +   ++ +  + |  | ||   ++   |    +++ | | | 
1074 VIDVNDN-APVIHNTD--LTHLSIEEDAQVGQVVTVLVISDSDEGGVQKTEIDVNSTLFR 1130

1631 VHTLSGAVHLAT-------------------------------WLTKLKHRKSVECT--- 1656
       +    | +|+                               +  |  |   +  |   
1131 ADSDKKLVVIASLKGHAGQRICSTVTATDVGGLRATSPYCVTVYPAKNTHHNPLVITPKQ 1190

1657 ---------------AIVESTEGQQDIAKV-------IAKIIR----------------- 1677
                      |+  |   ||  |         ||+                  
1191 NSIHYFDENIVYDELLKVKVLEEDGDIGNVTFRLDEMFKKILACRINNCTSTHLFISVND 1250

1678 TNQHSPIFRRQVYRGTIRENMPTGSSVLSKSLLPLVVSAIDED-PGSNGLVGYRMLSPKD 1736
      | + |+| +|  | |+ ||         |  +  + +|+| |    |  | |   +|  
1251 RNDNCPMFPKQDVRLTVLENEK------GKRQVGRIPAALDSDFHSDNTKVCYTTDTP-- 1302

1737 EQMFSVDQYSGAIRTQMSFDFEKMKEYSFYVQAFDMG---QPPRRSLMPSLI-VVTVIDE 1792
        |  |     + |  ||| |  |++   + |+|     + | + +  +++ ++ |+| 
1303 -LFFFSDPTLPILFTNSSFDREHKKQHQISITAYDCHLSCRDPHKPINGTIVALIDVLDI 1361

1793 NDEPPRFPSNSLDISMI---LPTANGVSVGGQTAQDMDSVG---SLRYFIKDQS------ 1840
     ||  |+|       +++   + | + +     |  | +  |   |+| |++  |      
1362 NDNFPKFSEKIYTSTVVQGHVTTGSHILTVQATDLDEEPEGLKYSIRGFVRSPSHSFVAA 1421

1841 -VPFSVDSKTGDV----LVKDSNGISDMTKLFDLEVFVTDG---KQSAS-YVMKISTIST 1891
       | |+|  ||++    ++|||+        +   | ||||   + +||  |+ +|   +
1422 ESPISIDKSTGELSATEILKDSS--------YSFTVVVTDGAGHEDTASVVVIDLSYELS 1473

1892 ENSKFKFT 1899
      |+ |+ +
1474 TNASFQIS 1481