Affine Alignment
 
Alignment between srd-46 (top F17A2.10 317aa) and srd-44 (bottom F17A2.8 317aa) score 9671

001 MLHIFLSYFYIIFFLIVFPTQLLLLYVIIFHSPKHLKTLKRIFLCNCSCQIFSMITLVLL 060
    |    ||      |++    |++|+| || ||||+| ||| | | ||  |+     +   
001 MFRKILSVLNPTVFVLSLCFQIILIYTIIRHSPKNLSTLKAILLTNCCFQLLQSSMVFFT 060

061 QARQVSNLNPVELWCYGPLRYLDAIVAYTMYVLCEGTVLMSSILIFITMYVKYEAVRSIH 120
    | + |++| |+||| ||| |+ +| + |+|+ + + + |+| + +|+| ++||+| | + 
061 QIQLVNHLVPIELWSYGPCRHFEAFMCYSMFHILQTSSLVSGLTVFLTTFMKYQAARHVR 120

121 RERSAKFSVIILSLSPLFITMSAEAYLTIEYHLPIEYQEKFSAINSNLGDHTVIGYIALD 180
      +     ||+   | + |+      | |   ||+| +||+  ||  | +++||| +   
121 PSKKKNCFVILFISSIVLISAGCGILLVIIQALPLEIREKYYRINLELDEYSVIGIVDYS 180

181 NIPAQIVFCTICGFFVIFPLIMFCLRRNIILFINSKLDLSSTTMRQQNRALINGLTLQAF 240
     +|+++    | |  || |+    ||| |+  + +    ||  +  |||  + ||||| |
181 VLPSRVNGIIINGLVVIVPITCLLLRRKILKLLTA----SSDALYFQNRVFLQGLTLQIF 236

241 LPLFCVCPIFICSFVALITKTEILLEQYFVSVVLLLPTFFEPYITFYTVSHYRKQVRIWL 300
           |||||| ++||||||    |+|+ |+  | |  +| +| | |+ |||++ +||
237 GHTLVYVPIFICSTISLITKTEYTFAQFFIFVLPHLTTVIDPLLTMYFVTPYRKRLMVWL 296

301 GKEN 304
      +|
297 RLKN 300