Affine Alignment
 
Alignment between srd-68 (top F09C6.7 324aa) and srd-2 (bottom R05H5.1 347aa) score 2299

029 LIFNFTTKDLRTMKYFLYPSNTAM--MISIGMGFATQAKKINNKESIALLCDGICKYAGP 086
    ||+  |   +|+  | +|  | |+    +  + | +  + | +  |+  +  | |||  |
045 LIWKRTPIQMRS--YAIYILNFALFDFATCIISFFSCQQVIFSDFSLVYIFHGPCKYVSP 102

087 TFCY--HCYNLWKSFGIVVCLINLHMLYYRAMSLKYMDTKKALLRTKL--------FSLH 136
     |||  ||+           |+   +  || ++ +   | | |+|  +        | | 
103 WFCYFCHCFMCHALAHSQWILLGSFIYRYRVLTGE-TPTAKDLIRNSVALYSMSLCFLLV 161

137 YLF-----PLLFQTQTFIPRQNHAQVHKETMQRHPQDNYAPYLDFGGFSEAQKAYLDVST 191
    |+|      ||||  | +    | + | +      +  +   +   |   |      +| 
162 YVFDNSDSDLLFQILTRV----HPEYHYD-----DESIWKKSIVVSGNISAFAPITLISI 212

192 VFLVLGSV--YCPFAGLYCKYQALSML-KPHLSPNTSSATRAMLRTLIKGLNYQILLPLL 248
    +++ +  |  ||  | || ++    +|  ||+  | |   ++    ||+ |  |  +|+ 
213 LYMTIPCVPIYC--AILYFRHNTRVILNNPHI--NLSPTAKSNHVKLIRALTVQAGIPIF 268

249 SYIPNTSLVILN-AVLEKQVPISQYTIVFGSMSCV--LEPFVQIYFITPYRRAI 299
      + +    +    ++   +|     | |  | |+  + | | | |+ |||  +
269 WLVASGIFTMSQFGIIGGPIP---ENITFRLMDCIPLISPIVTIIFVQPYREGL 319