Affine Alignment
 
Alignment between srh-200 (top F07C4.13 343aa) and srh-41 (bottom Y54G11A.12 345aa) score 5776

002 NFSCHPDVGYFDSTNFYSLAMHLITIVSTPFYLFGLYCILFKTPEIMKSIKWYLLNLRIW 061
    | || |   |  ||+|     |+ ++      ++ |+ +  |+|+ |||   |++|| + 
005 NQSCKPPT-YLASTDFLETGCHIGSVFMLTSSIYTLFLMAKKSPDTMKSSVPYMINLHVA 063

062 IIIFDYSITIMTIPFILAPFPAGFPLGVLRLFGVPTIIQTLMVLIIFAYMLIAMIAIIES 121
     +| | +  ++ +|    |  |    |+|        +       +   |   +| + | 
064 TMICDLTWAVIVLPMFFMPVIAAHASGILTWVTRERNVILWPPFAVLGGMAACLITLFEH 123

122 RFNTVCTFSW---KRKWKYWRR---PWLVA---NHVIVLLFVIPIGFMVPDQQLARQITF 172
    |   + | ||   ||||   ||   |   |   |  +| |  ||      ||  |+|  |
124 RHQAIVTRSWFVMKRKWT--RRIIYPLFYAISINFGLVELLTIP-----EDQAHAKQKAF 176

173 EKLPCLPSEIYNAPVLVLAIDYTYHFIAAVTYITFFTLQVIFFAGFLAWNSISQLMKNTM 232
    ++ ||||   ++    |+  | +       |     ++ | |+   + |+ + +    +|
177 KQHPCLPPIFFDDTSAVIQRDASLFNPHMYTCCFILSVLVCFYCLHVLWHLLPR-NNPSM 235

233 SRRTFNLQRKFFITLLIQLIVPLVFFFFPSFYVLVSVIIKYYNQAILNILFVGASVQGIV 292
    |  |  + | |||++ +|+ +|+|    |+ |  +|+   ||+| + ||  +  ++ |  
236 SSGTRKMLRNFFISMCVQVTIPIVVLLLPNLYWNISISFDYYSQELNNISIILFTLHGTS 295

293 STWVMLLVYRPYRESVVSL-FYKPFK 317
    |+  ++ +|+|||     | |||  |
296 SSIAVIFIYKPYRVYTKKLIFYKILK 321