Affine Alignment
 
Alignment between ttr-5 (top C40H1.5 139aa) and ttr-32 (bottom R13A5.3 139aa) score 6536

001 MKLIILLCLVASSYALIGNTQSAGVRGKLICNGKPAVGVLVKLYDDDRGIDADDLMASGK 060
    || +++|    |    ||  ||  |+||||||  ||  | ||+|| |  +  |  +    
001 MKFLLVLFATVSCTFAIGFKQSVAVKGKLICNDDPAKDVRVKMYDKD--VLMDTKLDDKS 058

061 TNGNGDFEISGHEDEVTPIDPKLNIYHDCNDGIKPCQRKFTIKIPDSYINKGKTVRNIYD 120
    |+|||+| ++| + |++ |||++||||||+||  ||||+ || +|| ||        ++|
059 TDGNGEFYLTGGDSEISSIDPRVNIYHDCDDGWTPCQRRLTIGVPDKYITNSDKPTKVFD 118

121 AGVIQLAGSFPGEGRDCLH 139
     | ||||| + || |||+|
119 LGTIQLAGKWVGETRDCIH 137