Affine Alignment
 
Alignment between C35A11.1 (top C35A11.1 429aa) and D1069.4 (bottom D1069.4 379aa) score 13110

009 LFDPNSNSTQAFLRKLAHFQRWYQPIHGYVCVLICVFGIFTNFVHVAVLSRPNMRNSAVN 068
    ||||   +    +  |  || +|   | | |+ ||+ |+|+| +|+|||||| ||  |||
009 LFDPQDPAVSGLIDALEQFQSFYTYFHRYACLFICIVGVFSNAIHIAVLSRPRMRRCAVN 068

069 CILTAVAVCDIGTMASYLIYIIHFVLRRNNSCTPTFTHSWLQFLLWHVVLSITLHTTSLW 128
     +||||| ||+ || || ||++ |   |       +++ || || +||  |+|||  +|+
069 SVLTAVAFCDVITMTSYSIYLMRF---RFYETDHGYSYIWLVFLKFHVWSSMTLHAITLY 125

129 LAVAMAFIRRMTLRVTALNSQWQRPKFAWKLCLGIYMVVFVLCIPNMLVHEIARVEGNDW 188
    +  |+||||   |    ++|+| +|+ +|+|   + +|+ ++|+| +++|+|  +|  + 
126 MGGALAFIRWQAL--GNIHSKWLQPRNSWQLFGVVSVVLSIVCLPTLVLHKIYEIESPEI 183

189 RPGKTCQKF-ASNYSEPVYTFMVSHAATINNCRLFKWNIWMIGILFKIIPCILLIFLSFG 247
          +    |  | |       + +|  +|  ||+|+||+ |+ | ||| ||++ +  
184 ETSTVSEVLRLSGQSIPKEVRYSLNFSTY-SCAFFKFNLWMLAIVLKAIPCALLLWFTIA 242

248 LVSKIRDAEKHRRKLTSVPSNASTDSKPLKKKNGTSDRTTLMLVVILLVFLITEFPQGII 307
    || |+|  ++ |  |       |   +   ||    |||| ||+++|+|||+|| ||| +
243 LVVKLRQTDEKRNYL------YSKSFRKHVKKTTVPDRTTYMLIIMLVVFLVTELPQGFL 296

308 SILCAIFTTDVHRYLYFYIGDVLDLLSLVNSSVNFVLYCVMSSRYRQTFWEVII--PSW 364
    ++|  ++| ||+ |+|  + ++|| |||+| ||+|+|||||||||||||  ++|   ||
297 ALLNGLYTGDVNIYIYKNLSELLDFLSLINCSVDFLLYCVMSSRYRQTFGHMLIRVESW 355