Affine Alignment
 
Alignment between sru-6 (top C33A12.8 335aa) and sru-27 (bottom C38C3.2 336aa) score 12635

009 PGTIHFNETYMNYQVEYNGFAQIFAVIPWIYILPSFHIICKILAISMTTNWKKPEPGINP 068
    || || |||++|++  +        + | +|+  +| ++ +||   +   +   +  || 
012 PG-IHGNETFINFEFSFFTLPMFLLIFPVLYMPITFIVMLRIL---VKLKYAMRDKNINV 067

069 HVFLVISFSQLTVFVFFLFDYLMHRLPSTGLFTSWCASNPPTHFLKIIFMTAYYTNYSAM 128
     +|  || ||||  +||+||++  || +||+|||||||  | |+| +++++ || ||+ |
068 PLFTAISISQLTCVLFFIFDFVYIRLMTTGMFTSWCASVSPNHYLMVLYISTYYVNYANM 127

129 IFPFLMPVVRLVVVGFPMSNFRLNSVLLKIGVPLIWIYPLFFTFFLIPAVGVCRQLSSPY 188
    |||||+  +|||++ +|    ++| |+||  +| | |||+|||||+ |||| |     |+
128 IFPFLVSTMRLVLIAYPQRQEKINRVILKSALPFILIYPMFFTFFMWPAVGYCVAAQGPF 187

189 PLGAVHIYYANAAFGMRNSYLYLYNTVAWLSLSILANILLFLKVLQAKSQIVSLQKQSVS 248
    | |++ | +  + ||++|+|  |+| + ||| |++ | +| +|+   ||   +  +   |
188 PHGSIIIGFRESWFGLKNNYFLLFNNLFWLSASLINNSVLLVKLAHLKSTTAAHTRSQKS 247

249 YKAELSITITTIVMIIFYVINGGFILMYLLFYGTNSYFSLLVVIKPFANDLQTCVVPWIF 308
    +|||+|+|+||+ ||  |+ |   ++   |     ||++  ++++|| |||+||+| |+|
248 HKAEVSLTVTTVSMICSYLSNSMIVIAAQLGI-EYSYYA--IMLRPFGNDLETCMVSWVF 304

309 YLTHPVFK 316
    |||||||+
305 YLTHPVFR 312