Affine Alignment
 
Alignment between srj-24 (top C05E4.11 340aa) and str-88 (bottom R08H2.2 339aa) score 3819

001 MHTSWAHYYVPKFNGFG---SFLVNPLFIFLILNDTKLMLGNYRWLMLFFAIFNMSCSVA 057
    |   |      +   ||   +   | + ++++        | || ||+ +|+  |  |+ 
001 MSARWVLDLTARSEEFGLVTAVFSNSILLYMLFYKANPSFGAYRRLMISYAVIEMVYSIL 060

058 DMLVPLCVHNYRHAFSVFTSGGPFEKY-----SELNQLLLAVRCGFIGTTYGILHAHFAY 112
         +  |      |  ||   |  |      +|  + |   ||   |   ||  || |
061 SFTSGMMAH------STETSCISFNLYHGYVSRDLAPIFLVDFCGIYFTLILILVVHFIY 114

113 RFLVLFKNNQLNKHFVPYGLLITIL------YCLFHFMFWTFTCYYFIGADLERKIYMRD 166
    |++|+   ++|     || |+  ++      + | +   | |     +  +|      |+
115 RYVVVCDFHKLRFFNGPY-LMFWVIGAAVSGFSLGYLKLWAFPEREHLTNEL------RE 167

167 PIMEIYDVDST----------KINMIIALYEGGSEIVIRKSIIGIIANTILSVASVLIYT 216
       + |++             | | |       ++ +++  + | + |      ||+| +
168 EFSQFYNLSMEEVVYNGPNFYKCNEIGECARPSADWIMQLILTGGLVN------SVIIMS 221

217 IIGFLIIRKLRSNTLLMSKKTKRLQDQLMRALIVQSVIPSFVSFAPTMASWYELIIGFHL 276
      ||   +||| |    | +|  ||+||| |||||+|||    + | +  +   |  ||+
222 YCGFCCCKKLRENRKHASCRTADLQNQLMIALIVQAVIPIVFMYIPILLFFTTPI--FHI 279

277 GRAVYY-TSSVLVSTFPFFDPTAIIVFIPSFRAKCEKFGMNLLTLGKAGQRSDGNNTAQV 335
    |   |   +   ++ +|  |   ||  |  ||   ++    +   |||   || ++++| 
280 GFGPYINVAMATLAIYPPMDQFFIIYIIKDFRTALKE----IFKCGKA--VSDASSSSQA 333

336 ISN 338
     |+
334 FSS 336