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UCSC Genome Browser Gene Interaction Graph
Gene interactions and pathways from curated databases and text-mining
SMN1: top 25 interacting genes (chr5:70220913-70248842)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only SMN1-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-SMN1 interactions     Show top Genes on graph    

Less-frequently mentioned interactions with SMN1, not among the Top 25
Other genes interacting with SMN1. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

A1BG A2M ACACA ACIN1 ACSM2B ACTB ACTL6B
ADAMTS10 ADNP AFF4 AGAP1 AGPS AHCTF1 AHSA1
AIFM1 AKAP8 AKAP8L ALDOA ANAPC1 ANAPC16 ANAPC2
ANAPC5 ANGPT2 ANKAR ANKHD1 ANKRD13A ANKRD17 ANXA1
ANXA2 APLP1 ARFGAP1 ASPH ATAD2 ATG2A ATG2B
ATG3 ATG4B ATP1A1 ATP2A3 ATP5A1 ATP5B ATP6V1A
ATP6V1G2 BAG2 BAG5 BAG6 BAIAP2L1 BAZ1A BAZ1B
BCL2 BCLAF1 BDH1 BMP1 BMP10 BMP15 BMP3
BMP4 BMP5 BMP6 BMP7 BOLA2 BOLA2B BPNT1
C19orf60 C19orf68 C2orf47 C9orf114 CAB39 CAD CALB1
CALCOCO2 CALM1 CALU CARHSP1 CCDC90B CCL2 CCNC
CCT3 CCT4 CDC23 CDC42 CDH1 CDIPT CDK19
CDK8 CDKN1A CENPB CEP170 CEP290 CFP CGN
CHD9 CIRH1A CKB CKM CKMT1A CKMT1B CLNS1A
CLPB CMSS1 CNTNAP2 CNTRL COIL COL4A2 COL4A5
COPA COPS2 COPS3 COPS4 COPS5 COPS6 COPS8
CPLX1 CPNE6 CPT1A CRELD2 CRIP2 CRISPLD2 CSAD
CSE1L CTGF CUL1 CUL3 CUL4A CWC15 DBN1
DCAF8 DCD DDA1 DDAH1 DDAH2 DDB1 DDX17
DDX21 DDX27 DDX31 DDX39B DDX3X DDX5 DDX50
DDX52 DICER1 DKC1 DMPK DNAJA1 DNAJA2 DNAJA3
DNAJB1 DNAJB11 DNAJB2 DNAJB6 DNALI1 DNM1 DNM2
DNTTIP2 DOCK7 DOK6 DPYSL2 DSG1 DSP DTD1
DUS2 DYNC1H1 DYNC1I1 DYNC1I2 DYNC1LI1 DYNLL1 E2F7
EBNA1BP2 ECH1 EEF1A1 EFTUD2 EIF2A EIF3G EIF4A1
EIF5A ELAVL1 ELL2 ELMSAN1 EMD EME1 ENO3
EPHB2 EPS15L1 ERC2 ERCC1 ERCC4 ERH ERLIN2
ESR1 ESR2 ETV5 EWSR1 EXOC1 EXOC4 EXOSC10
EXOSC4 EXT2 EZH2 FAM20C FAR1 FARSB FBL
FBLL1 FBXO2 FGB FGF2 FH FKBP10 FLAD1
FLG2 FLNA FLNC FMR1 FSCN1 FTSJ3 FUBP1
FUT1 FXR2 FYCO1 GABARAP GAPDH GAR1 GAS8
GATA6 GCC2 GCFC2 GCN1L1 GDF9 GDI1 GDI2
GIGYF2 GNAI1 GNAI3 GNL3 GPC4 GPI GPN3
GPS1 GRAP2 GRB10 GSK3B GSN GSTM1 GTF3C2
GTF3C3 GTF3C4 GTF3C5 GUK1 H1FX H2BFS HABP4
HADHA HADHB HBA1 HCFC1 HDAC11 HEATR1 HGF
HHIP HIRIP3 HIST1H2AB HIST1H2AE HIST1H3A HIST1H3B HIST1H3C
HIST1H3D HIST1H3E HIST1H3F HIST1H3G HIST1H3H HIST1H3I HIST1H3J
HIST1H4A HIST2H2AC HIST3H3 HJURP HMGXB3 HNRNPA2B1 HNRNPCL1
HNRNPF HNRNPH1 HNRNPH2 HNRNPH3 HNRNPM HNRNPR HNRNPU
HNRNPUL1 HRNR HSD17B12 HSP90AA1 HSPA1A HSPA1L HSPA5
HSPA6 HSPA8 HSPA9 HSPB1 HSPD1 HTRA2 HUWE1
ID2 IFNG IGF1 IGF2BP3 IGHG1 IGHM IK
IKZF1 IL13 IL1A IL1B IL4 IL6 ILF3
ILK IMMT INPP5K IPO4 IQCB1 IQGAP2 IQGAP3
IRF6 ITGA11 JADE1 JUN KANK2 KANSL3 KDM1A
KIF5A KLF4 KLHL5 KMT2B KPNA2 KPNA4 KPNB1
KRT3 KRT4 KRT84 LACTB LAMB1 LAS1L LDHAL6A
LENG8 LEPRE1 LGALS1 LGALS3 LIMA1 LMNA LOX
LPA LPCAT2 LRIF1 LRP1 LRRC59 LSM1 LSM10
LSM11 LSM2 LSM3 LSM4 LSM5 LSM6 LSM7
LTN1 LUC7L3 MAG MAP1B MAP3K5 MAPK10 MAPK11
MAPK12 MAPK13 MAPK14 MAPK15 MAPK4 MAPK6 MAPK7
MAPK8 MAPK9 MAPRE1 MAST2 MCCC2 MDC1 MDH1
MDN1 MECP2 MED1 MED10 MED11 MED12 MED13
MED13L MED14 MED15 MED16 MED17 MED18 MED19
MED20 MED21 MED22 MED23 MED24 MED25 MED26
MED27 MED28 MED29 MED30 MED31 MED4 MED6
MED7 MED8 MED9 MIB1 MKI67 MLF2 MLLT1
MMP2 MPP1 MRPL16 MRPL37 MRPS15 MRPS22 MSH2
MSH6 MSR1 MUS81 MYBBP1A MYCBP2 MYH11 MYH13
MYH14 MYH4 MYH7 MYH7B MYH9 MYL6 MYLK2
MYO1C MYO1D NA NAP1L1 NAT10 NCOA3 NDUFA10
NEBL NEFH NEFM NGFR NKIRAS2 NKRF NMT2
NOC4L NOL8 NONO NOP2 NOP56 NOP58 NOTCH1
NOTCH2 NOTCH3 NOTCH4 NOX4 NPM1 NPPA NRIP1
NUDT3 NUMA1 NUP133 NUP153 NUP188 NUP85 NUP93
NUP98 OSTF1 OXCT1 P4HA1 P4HB PAFAH1B1 PAGR1
PAN2 PAXBP1 PCP4 PCP4L1 PDCD11 PDE4DIP PDGFB
PEA15 PEBP1 PELP1 PES1 PFDN2 PGAM1 PGD
PGK1 PHB2 PHIP PHKG2 PIK3CA PIK3R1 PIP
PKM PKP3 PLAU PLK1 PLXNA3 PML PNN
POLR1E POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F
POLR2G POLR2H POLR2I POLR2J POLR2L POLR2M POM121
POM121C POP7 PPAN PPARG PPIG PPP3R1 PPP4C
PPP6R1 PPP6R3 PPRC1 PRDX1 PRKDC PRMT5 PRPF4B
PRPF6 PSMA1 PSMA2 PSMA3 PSMA4 PSMA5 PSMA6
PSMA7 PSMB1 PSMB2 PSMB3 PSMB5 PSMB6 PSMB7
PSMD11 PSMD12 PSMD6 PSME1 PSME3 PTBP1 PTCD3
PTPN23 PURA PURB PWP1 QARS QDPR RAB14
RAB1A RAB35 RAB3C RAC1 RAN RANGAP1 RBBP4
RBBP6 RBBP7 RBFOX2 RBM10 RBM12B-AS1 RBM14 RBM22
RBM25 RBM28 RBM34 RBM39 RBM48 RCN1 RCN2
RCOR2 RECQL5 REEP5 RFC1 RFC2 RFC4 RFX1
RGCC RHO RHOA RIF1 RIMS2 RNF19A RNF219
RNH1 RNPS1 RPAP2 RPL10 RPL10A RPL13 RPL17
RPL18A RPL23 RPL29 RPL36AL RPL6 RPL7 RPL7A
RPLP0 RPS11 RPS13 RPS16 RPS17 RPS18 RPS2
RPS25 RPS26 RPS27A RPS27L RPS3 RPS4X RPS9
RRBP1 RRP1 RRP12 RRP1B RSL1D1 RUNX1 RUVBL1
RUVBL2 RXRA S100A8 SAP18 SDF4 SEC16A SEMA5B
SEMG2 SENP3 SERPINH1 SETDB1 SF3A1 SF3B2 SFPQ
SFTPC SGPL1 SH3BGRL2 SHROOM3 SIN3A SIN3B SKP1
SLC25A13 SLC25A22 SLC25A3 SLC25A42 SLC5A3 SLIRP SLX1A
SLX1B SLX4 SLX4IP SMAD1 SMAD2 SMAD7 SMARCA5
SMC1A SMC3 SMC4 SMC5 SNRNP70 SNUPN SNW1
SON SP110 SPATA24 SPTBN2 SQRDL SRF SRP19
SRP54 SRP68 SRP9 SRRM2 SRSF3 SRSF5 STAG1
STAT3 STAU1 STK31 STXBP1 STXBP2 STXBP3 SUGT1
SULT1A3 SULT1A4 SUMO3 SURF6 SVOPL SYN2 SYNCRIP
SYNE2 TARDBP TCERG1 TCOF1 TFIP11 TGFB3 TGFBR1
TGS1 THBS1 THRAP3 TIAL1 TIMM17B TIMM50 TLE1
TMLHE TMPO TMSB4X TPI1 TRIM21 TRMT2A TRMT61A
TTC21B TTC27 TTC4 TTF2 TTN TUBA1A TUBA1B
TUBA1C TUBA4A TUBA4B TUBB TUBB2A TUBB3 TUBB4B
TUBB6 TUBB8 TULP3 TWF2 U2SURP UBB UBC
UBE2K UBE2V1 UBE3B UBL4A UBN1 UBR3 UBR5
UBTF UCHL1 UNG UQCRC2 USP4 USP7 UTP14A
UTP18 UTP6 VAMP2 VMAC VPRBP VPS28 VPS41
WDR18 WDR33 WDR36 WDR45 WDR73 WDR74 WDR77
WDYHV1 WIZ WNK4 WRAP53 WRNIP1 XAB2 XPOT
YBX1 YBX2 YBX3 YLPM1 YWHAB ZBTB16 ZBTB9
ZC3H18 ZC3HAV1 ZCCHC10 ZCCHC8 ZFP91 ZFR ZMYM2
ZNF281 ZNF326 ZNF417 ZNF431 ZNF512B ZNF638 ZRANB2
ZXDC

Data information
Please see the Gene Interactions Track Manual.