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UCSC Genome Browser Gene Interaction Graph
Gene interactions and pathways from curated databases and text-mining
SMC1A: top 25 interacting genes (chrX:53401069-53449603)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only SMC1A-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-SMC1A interactions     Show top Genes on graph    

Less-frequently mentioned interactions with SMC1A, not among the Top 25
Other genes interacting with SMC1A. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

ACACB ▸ ACIN1 ▸ ADD3 ▸ ADNP ▸ AFG3L2 ▸ AGL ▸ AGPS ▸
AIFM1 ▸ AIRE ▸ AKAP8 ▸ AKAP8L ▸ ALDH3A2 ▸ AMBRA1 ▸ AMOT ▸
ANKRD28 ▸ ANKRD44 ▸ APC ▸ ARHGEF2 ▸ ARMCX3 ▸ ATAD2 ▸ ATG14 ▸
ATG2A ▸ ATG2B ▸ ATG4B ▸ ATG4C ▸ ATM ▸ ATP1A1 ▸ ATP2A3 ▸
ATR ▸ ATRX ▸ AURKB ▸ BAG2 ▸ BAG6 ▸ BAIAP2L1 ▸ BARD1 ▸
BAZ1A ▸ BAZ1B ▸ BCLAF1 ▸ BDH1 ▸ BECN1 ▸ BLM ▸ BRCA1 ▸
C1QBP ▸ C2orf47 ▸ CACYBP ▸ CAD ▸ CALM1 ▸ CALU ▸ CAMKK2 ▸
CAND1 ▸ CASP4 ▸ CCT3 ▸ CCT4 ▸ CCT8 ▸ CDCA5 ▸ CDK12 ▸
CDK2 ▸ CDK20 ▸ CDK4 ▸ CDK8 ▸ CEBPA ▸ CEBPZ ▸ CENPK ▸
CENPL ▸ CENPM ▸ CENPN ▸ CENPO ▸ CENPP ▸ CENPQ ▸ CENPT ▸
CENPU ▸ CEP162 ▸ CEP170B ▸ CEP192 ▸ CHCHD3 ▸ CHD3 ▸ CHD6 ▸
CHTF18 ▸ CIRH1A ▸ CKAP5 ▸ CLASP1 ▸ CLASP2 ▸ CLIP1 ▸ CLP1 ▸
CLPB ▸ CLU ▸ CPNE3 ▸ CPSF1 ▸ CPSF2 ▸ CPSF3 ▸ CPSF7 ▸
CPT1A ▸ CROCC ▸ CSTF1 ▸ CSTF2 ▸ CSTF3 ▸ CTCF ▸ CTNNBL1 ▸
CUL3 ▸ CWC15 ▸ CYLD ▸ DDX17 ▸ DDX20 ▸ DDX23 ▸ DDX27 ▸
DDX5 ▸ DFFA ▸ DHX38 ▸ DIABLO ▸ DICER1 ▸ DIDO1 ▸ DKC1 ▸
DNAJA1 ▸ DNAJA2 ▸ DNAJA3 ▸ DNAJB1 ▸ DNAJB11 ▸ DNAJB2 ▸ DNAJB6 ▸
DNAJC7 ▸ DNTTIP2 ▸ DSN1 ▸ DYNC1H1 ▸ DZIP3 ▸ E2F2 ▸ EBNA1BP2 ▸
EEF2 ▸ EFTUD2 ▸ EHMT2 ▸ EPS8 ▸ ERC1 ▸ ERCC6L ▸ ERLIN2 ▸
ESCO1 ▸ ESCO2 ▸ ESPL1 ▸ ESYT2 ▸ ETV5 ▸ FAF2 ▸ FAM115A ▸
FAM175B ▸ FAM193A ▸ FANCD2 ▸ FANCI ▸ FBF1 ▸ FBXO6 ▸ FKBP6 ▸
FKBP8 ▸ FLCN ▸ FLNA ▸ FLNC ▸ FNIP1 ▸ GCFC2 ▸ GCN1L1 ▸
GEMIN2 ▸ GEMIN4 ▸ GEMIN5 ▸ GFPT1 ▸ GSPT1 ▸ GTF2F1 ▸ GTF2F2 ▸
GYG1 ▸ GYS1 ▸ H1FX ▸ H2AFX ▸ HDAC1 ▸ HDAC11 ▸ HDAC2 ▸
HDAC5 ▸ HDAC8 ▸ HEATR1 ▸ HECTD1 ▸ HHIP ▸ HIST1H2AC ▸ HIST1H2BO ▸
HIST1H3A ▸ HIST1H3B ▸ HIST1H3C ▸ HIST1H3D ▸ HIST1H3E ▸ HIST1H3F ▸ HIST1H3G ▸
HIST1H3H ▸ HIST1H3I ▸ HIST1H3J ▸ HIST1H4A ▸ HIST3H3 ▸ HJURP ▸ HMGA1 ▸
HMGN1 ▸ HNRNPA0 ▸ HNRNPA1 ▸ HNRNPA2B1 ▸ HNRNPA3 ▸ HNRNPC ▸ HNRNPD ▸
HNRNPF ▸ HNRNPH1 ▸ HNRNPH2 ▸ HNRNPK ▸ HNRNPL ▸ HNRNPM ▸ HNRNPR ▸
HNRNPU ▸ HSD17B12 ▸ HSPA2 ▸ HSPA8 ▸ HUWE1 ▸ IGF2BP3 ▸ IK ▸
IKZF1 ▸ ILK ▸ INCENP ▸ IPO7 ▸ IQGAP2 ▸ ITCH ▸ ITGB3BP ▸
KCTD10 ▸ KCTD3 ▸ KDM1A ▸ KDM1B ▸ KIAA0226 ▸ KIAA0226L ▸ KIF13A ▸
KIF18A ▸ KIF2A ▸ KIF2B ▸ KIF2C ▸ KIFC1 ▸ KNTC1 ▸ KPNA6 ▸
KPNB1 ▸ KRI1 ▸ LCN1 ▸ LCN1P1 ▸ LMNA ▸ LMNB1 ▸ LMNB2 ▸
LSM2 ▸ MAD1L1 ▸ MAD2L1 ▸ MAGED1 ▸ MAGED2 ▸ MAGOH ▸ MAP3K5 ▸
MAP3K6 ▸ MAPK14 ▸ MAPRE1 ▸ MAST3 ▸ MAU2 ▸ MBD2 ▸ MBD3 ▸
MCCC2 ▸ MCM2 ▸ MCM5 ▸ MCM6 ▸ MCM7 ▸ MDC1 ▸ MDM1 ▸
MDN1 ▸ MECP2 ▸ MET ▸ METTL21B ▸ MGMT ▸ MIS12 ▸ MISP ▸
MLF2 ▸ MLH1 ▸ MME ▸ MRE11A ▸ MSH2 ▸ MSH6 ▸ MTA1 ▸
MTA2 ▸ MTMR3 ▸ MYBBP1A ▸ MYC ▸ MYCBP2 ▸ NASP ▸ NBN ▸
NCBP1 ▸ NCBP2 ▸ NDC80 ▸ NDE1 ▸ NDEL1 ▸ NDUFA10 ▸ NEDD8 ▸
NEK4 ▸ NEK6 ▸ NFATC4 ▸ NHP2L1 ▸ NIPBL ▸ NME2 ▸ NOP2 ▸
NOP56 ▸ NOP58 ▸ NOTCH1 ▸ NOTCH2 ▸ NPLOC4 ▸ NRBF2 ▸ NSL1 ▸
NSMCE2 ▸ NTPCR ▸ NUDC ▸ NUDT21 ▸ NUF2 ▸ NUMA1 ▸ NUP107 ▸
NUP133 ▸ NUP153 ▸ NUP160 ▸ NUP37 ▸ NUP43 ▸ NUP85 ▸ NUP93 ▸
NUP98 ▸ OBSL1 ▸ OGDH ▸ PABPC1 ▸ PABPN1 ▸ PAFAH1B1 ▸ PAPD7 ▸
PAPOLA ▸ PARP1 ▸ PARS2 ▸ PAXBP1 ▸ PAXIP1 ▸ PCBP1 ▸ PCBP2 ▸
PCF11 ▸ PCNA ▸ PDCD11 ▸ PDS5A ▸ PDS5B ▸ PES1 ▸ PHF1 ▸
PHF5A ▸ PHIP ▸ PIK3C3 ▸ PIK3CG ▸ PIK3R4 ▸ PLEKHG1 ▸ PLK1 ▸
PLK2 ▸ PLRG1 ▸ PMF1 ▸ PML ▸ PNN ▸ POLA1 ▸ POLR2A ▸
POLR2B ▸ POLR2C ▸ POLR2D ▸ POLR2E ▸ POLR2F ▸ POLR2G ▸ POLR2H ▸
POLR2I ▸ POLR2J ▸ POLR2K ▸ POLR2L ▸ POT1 ▸ PPAN ▸ PPP1CC ▸
PPP1R12A ▸ PPP1R9A ▸ PPP1R9B ▸ PPP6C ▸ PPP6R1 ▸ PPP6R2 ▸ PPP6R3 ▸
PRKAA1 ▸ PRKAA2 ▸ PRKAB2 ▸ PRKAG1 ▸ PRKAG2 ▸ PRKDC ▸ PRPF19 ▸
PRPF4 ▸ PRPF6 ▸ PRPF8 ▸ PSMB2 ▸ PSMC1 ▸ PSMC2 ▸ PSMC4 ▸
PSMC5 ▸ PSMC6 ▸ PSMD1 ▸ PSMD2 ▸ PTBP1 ▸ PTOV1 ▸ PWP1 ▸
RAD21 ▸ RAD21L1 ▸ RAD50 ▸ RAE1 ▸ RANBP2 ▸ RANBP9 ▸ RANGAP1 ▸
RASSF8 ▸ RB1 ▸ RB1CC1 ▸ RBBP4 ▸ RBBP7 ▸ RBM12B-AS1 ▸ RBM14 ▸
RBM22 ▸ RBM28 ▸ RBM34 ▸ RBM8A ▸ RBMX ▸ RCC2 ▸ RCN1 ▸
RCN2 ▸ RCOR2 ▸ REC8 ▸ RFC1 ▸ RIF1 ▸ RNF20 ▸ RNF219 ▸
RNF8 ▸ RNPS1 ▸ RPGR ▸ RPS27 ▸ RRP12 ▸ RSL1D1 ▸ RUNX1 ▸
RUVBL2 ▸ SDCCAG3 ▸ SEC13 ▸ SEC16A ▸ SEH1L ▸ SF3A1 ▸ SF3A2 ▸
SF3A3 ▸ SF3B1 ▸ SF3B2 ▸ SF3B3 ▸ SF3B4 ▸ SF3B5 ▸ SGOL1 ▸
SGOL2 ▸ SH3PXD2A ▸ SHKBP1 ▸ SKA1 ▸ SKA2 ▸ SLC25A42 ▸ SLC27A4 ▸
SMARCA5 ▸ SMARCAD1 ▸ SMC1B ▸ SMC2 ▸ SMC3 ▸ SMC4 ▸ SMN1 ▸
SMN2 ▸ SNRNP200 ▸ SNRNP40 ▸ SNRNP70 ▸ SNRPA ▸ SNRPA1 ▸ SNRPB ▸
SNRPB2 ▸ SNRPD1 ▸ SNRPD2 ▸ SNRPD3 ▸ SNRPE ▸ SNRPF ▸ SNRPG ▸
SNW1 ▸ SNX18 ▸ SON ▸ SPC24 ▸ SPC25 ▸ SPDL1 ▸ SPECC1 ▸
SPTLC1 ▸ SRRM1 ▸ SRRM2 ▸ SRSF1 ▸ SRSF11 ▸ SRSF2 ▸ SRSF3 ▸
SRSF4 ▸ SRSF5 ▸ SRSF6 ▸ SRSF7 ▸ SRSF9 ▸ SSR4 ▸ SSU72 ▸
STAG1 ▸ STAG2 ▸ STAG3 ▸ STIM1 ▸ STIM2 ▸ STUB1 ▸ STYXL1 ▸
SUGP1 ▸ SUGT1 ▸ SUMO1 ▸ SUN1 ▸ SUN2 ▸ SUPT16H ▸ SVIL ▸
SYCE1 ▸ SYCE2 ▸ SYCP1 ▸ SYCP2 ▸ SYCP3 ▸ SYNE1 ▸ SYNE2 ▸
TAOK1 ▸ TBC1D7 ▸ TBK1 ▸ TBKBP1 ▸ TERF1 ▸ TERF2 ▸ TERF2IP ▸
TEX12 ▸ TFDP1 ▸ TFIP11 ▸ THRA ▸ THRAP3 ▸ THRB ▸ TINF2 ▸
TMOD3 ▸ TOP2A ▸ TP53BP1 ▸ TP53BP2 ▸ TPM3 ▸ TPM4 ▸ TRABD ▸
TRAFD1 ▸ TRIM28 ▸ TRIM41 ▸ TSC1 ▸ TTC27 ▸ TTF2 ▸ TXNL4A ▸
TYW1 ▸ U2AF1 ▸ U2AF2 ▸ UBC ▸ UBE2I ▸ UBL4A ▸ UBR5 ▸
UFD1L ▸ ULK1 ▸ UPF3B ▸ USP10 ▸ USP11 ▸ USP13 ▸ USP32 ▸
UTP14A ▸ UTP18 ▸ UTP6 ▸ UVRAG ▸ WAPAL ▸ WDR33 ▸ WDR36 ▸
WDR45 ▸ WDR74 ▸ WFDC5 ▸ WRNIP1 ▸ XAB2 ▸ XPO1 ▸ XPOT ▸
YBX2 ▸ YBX3 ▸ YLPM1 ▸ YY1 ▸ ZFR ▸ ZMYM2 ▸ ZNF326 ▸
ZSCAN2 ▸ ZW10 ▸ ZWILCH ▸ ZWINT ▸

Data information
Please see the Gene Interactions Track Manual.