ID:YTDC1_HUMAN DESCRIPTION: RecName: Full=YTH domain-containing protein 1; AltName: Full=Putative splicing factor YT521; FUNCTION: May be part of a signal transduction pathway that influences splice site selection (By similarity). SUBUNIT: Interacts with EMD, KHDRBS1/SAM68, KHDRBS3, TRA2B/SFRS10, SC35 and SF2 (By similarity). Interacts with RBMX. SUBCELLULAR LOCATION: Nucleus (By similarity). Note=Localizes to a novel subnuclear structure, the YT bodies (By similarity). SIMILARITY: Contains 1 YTH domain. SEQUENCE CAUTION: Sequence=AAY41024.1; Type=Erroneous gene model prediction; Sequence=BAB71181.1; Type=Erroneous initiation;
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
ModBase Predicted Comparative 3D Structure on Q96MU7
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.