Human Gene IL32 (ENST00000525643.7_11) from GENCODE V47lift37
  Description: interleukin 32, transcript variant 19 (from RefSeq NM_001376923.1)
Gencode Transcript: ENST00000525643.7_11
Gencode Gene: ENSG00000008517.19_18
Transcript (Including UTRs)
   Position: hg19 chr16:3,115,641-3,119,531 Size: 3,891 Total Exon Count: 7 Strand: +
Coding Region
   Position: hg19 chr16:3,115,813-3,119,356 Size: 3,544 Coding Exon Count: 6 

Page IndexSequence and LinksUniProtKB CommentsPrimersMalaCardsCTD
Gene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsPathwaysOther NamesModel InformationMethods
Data last updated at UCSC: 2024-08-22 23:36:26

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:3,115,641-3,119,531)mRNA (may differ from genome)Protein (188 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaAlphaFold
BioGPSEnsemblEntrez GeneExonPrimerGeneCardsHGNC
MalacardsMGIOMIMPubMedReactomeUniProtKB
WikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: IL32_HUMAN
DESCRIPTION: RecName: Full=Interleukin-32; Short=IL-32; AltName: Full=Natural killer cells protein 4; AltName: Full=Tumor necrosis factor alpha-inducing factor; Flags: Precursor;
FUNCTION: Cytokine that may play a role in innate and adaptive immune responses. It induces various cytokines such as TNFA/TNF- alpha and IL8. It activates typical cytokine signal pathways of NF-kappa-B and p38 MAPK.
SUBCELLULAR LOCATION: Secreted.
TISSUE SPECIFICITY: Selectively expressed in lymphocytes. Expression is more prominent in immune cells than in non-immune cells.
INDUCTION: Expression increased after activation of T-cells by mitogens or activation of NK cells by IL2/interleukin-2.

-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3


-  MalaCards Disease Associations
  MalaCards Gene Search: IL32
Diseases sorted by gene-association score: venezuelan equine encephalitis (11), pancreatic cancer (4)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 110.04 RPKM in Spleen
Total median expression: 1026.61 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -27.9076-0.367 Picture PostScript Text
3' UTR -31.30175-0.179 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  Pfam Domains:
PF15225 - Interleukin 32

SCOP Domains:
58113 - Apolipoprotein A-I

ModBase Predicted Comparative 3D Structure on P24001
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0005125 cytokine activity
GO:0005515 protein binding

Biological Process:
GO:0006952 defense response
GO:0006955 immune response
GO:0007155 cell adhesion
GO:0010469 regulation of receptor activity
GO:0019221 cytokine-mediated signaling pathway

Cellular Component:
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005829 cytosol
GO:0016020 membrane


-  Descriptions from all associated GenBank mRNAs
  BC009401 - Homo sapiens interleukin 32, mRNA (cDNA clone MGC:15353 IMAGE:4300407), complete cds.
AY495332 - Homo sapiens tumor necrosis factor alpha-inducing factor beta isoform (TAIF) mRNA, complete cds, alternatively spliced.
AY495331 - Homo sapiens tumor necrosis factor alpha-inducing factor alpha isoform (TAIF) mRNA, complete cds, alternatively spliced.
AY495333 - Homo sapiens tumor necrosis factor alpha-inducing factor delta isoform (TAIF) mRNA, complete cds, alternatively spliced.
AK307158 - Homo sapiens cDNA, FLJ97106.
FJ985780 - Homo sapiens interleukin-32 theta mRNA, complete cds, alternatively spliced.
AK310053 - Homo sapiens cDNA, FLJ17095.
AK296143 - Homo sapiens cDNA FLJ55649 complete cds, highly similar to Homo sapiens interleukin 32 (IL32), transcript variant 6, mRNA.
BC105602 - Homo sapiens interleukin 32, mRNA (cDNA clone MGC:111206 IMAGE:6496101), complete cds.
BC018782 - Homo sapiens interleukin 32, mRNA (cDNA clone MGC:32101 IMAGE:4873608), complete cds.
M59807 - Human NK4 mRNA, complete cds.
AB590933 - Synthetic construct DNA, clone: pFN21AE1668, Homo sapiens IL32 gene for interleukin 32, without stop codon, in Flexi system.
EU339107 - Homo sapiens interleukin 32 variant mRNA, complete cds.
JN546102 - Homo sapiens interleukin-32 eta mRNA, complete cds, alternatively spliced.
KJ901957 - Synthetic construct Homo sapiens clone ccsbBroadEn_11351 IL32 gene, encodes complete protein.
FJ985781 - Homo sapiens interleukin-32 small mRNA, complete cds, alternatively spliced.
JD412147 - Sequence 393171 from Patent EP1572962.
JD129411 - Sequence 110435 from Patent EP1572962.
JD226458 - Sequence 207482 from Patent EP1572962.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein P24001 (Reactome details) participates in the following event(s):

R-HSA-448591 Interleukin-32 binds proteinase-3
R-HSA-449836 Other interleukin signaling
R-HSA-449147 Signaling by Interleukins
R-HSA-1280215 Cytokine Signaling in Immune system
R-HSA-168256 Immune System

-  Other Names for This Gene
  Alternate Gene Symbols: A6NNM0, A8MPX0, B4DJM1, B8Q191, D3DUB0, D3DUB2, ENST00000525643.1, ENST00000525643.2, ENST00000525643.3, ENST00000525643.4, ENST00000525643.5, ENST00000525643.6, IL32_HUMAN, NK4, NM_001376923, P24001, Q5VFH7, Q5VFH8, Q8WV38, Q96GK9, TAIF, uc324awc.1, uc324awc.2
UCSC ID: ENST00000525643.7_11
RefSeq Accession: NM_001376923.1
Protein: P24001 (aka IL32_HUMAN)

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.