CSHL Long RNA-seq Downloadable Files
  Long RNA-seq from ENCODE/Cold Spring Harbor Lab   (Track settings)
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 660 files Cell Line Replicate View Cross Lab
BioReplicate		 Lab
Exp ID		 UCSC Accession GEO Accession Size File Type Submitted RESTRICTED
Until		 Additional Details
Adrenal  Transcript ENSEMBL V651AWC,1BWCLID20728,LID20729wgEncodeEM002520GSM9001884.6 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6344; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=c6c98fb4cf7b4727b08e8f704224925b;
Adrenal  Transcripts De novo1AWC,1BWCLID20728,LID20729wgEncodeEM002520GSM9001884.8 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5583; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=8344d850cdfa6b76fa407f4d352f4b9f;
Adrenal1FastqRd11AWCLID20728wgEncodeEM002520GSM9001884.4 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5493; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=de6c526f76a63ee81cea4a049749a061;
Adrenal1FastqRd21AWCLID20728wgEncodeEM002520GSM9001884.6 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5493; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=ac24a9dc9a416f2ddc701132761534ed;
Adrenal1Minus Raw signal1AWCLID20728wgEncodeEM002520GSM900188 68 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5493; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksMinusRawRep1; md5sum=2e6d0b0d91abc884e7ec9f9b481b4eda;
Adrenal1Plus Raw signal1AWCLID20728wgEncodeEM002520GSM900188 68 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5493; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksPlusRawRep1; md5sum=b55ceb89b9161129ed59cdeffa28a221;
Adrenal1Spike-ins1AWCLID20728wgEncodeEM002520GSM900188 48 MBspikeins2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7769; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=1b21f970cb14900cd8b2b670fe9197e0;
Adrenal2FastqRd11BWCLID20729wgEncodeEM002520GSM9001884.7 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5485; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=074f8e782cb3bb73e085cc50e1546209;
Adrenal2FastqRd21BWCLID20729wgEncodeEM002520GSM9001884.9 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5485; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=6e9864d8c304153c2e0ca75811c9434d;
Adrenal2Minus Raw signal1BWCLID20729wgEncodeEM002520GSM900188 69 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5485; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksMinusRawRep2; md5sum=ad94ee360d2cb11a4da4362b486fa74a;
Adrenal2Plus Raw signal1BWCLID20729wgEncodeEM002520GSM900188 70 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5485; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksPlusRawRep2; md5sum=98fa11287628128bbe42292eea6a6681;
Adrenal2Spike-ins1BWCLID20729wgEncodeEM002520GSM900188 46 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7762; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=698258611989dc1ae12e5785660c1ecf;
Adrenal  Junctions1AWC,1BWCLID20728,LID20729wgEncodeEM002520GSM9001885.3 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6229; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksJunctions; md5sum=72565c566abec8a00085304eae5853e5;
Adrenal  Genes ENSEMBL V651AWC,1BWCLID20728,LID20729wgEncodeEM002520GSM9001883.0 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6344; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=6a8296ef9300ea6e0345976d96d93550;
Adrenal  Genes De Novo1AWC,1BWCLID20728,LID20729wgEncodeEM002520GSM9001881.6 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7091; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=7f450ab4538aa6aaf25f5b151ecb1098;
Adrenal  Exons ENSEMBL V651AWC,1BWCLID20728,LID20729wgEncodeEM002520GSM900188 15 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6344; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=074201ccc42b3fdf1c8cbdec4b4aa455;
Adrenal  ExonsDenovo1AWC,1BWCLID20728,LID20729wgEncodeEM002520GSM9001885.8 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7091; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=3bd540ef60b9b2bb13b8b0daef51c802;
Adrenal  Contigs1AWC,1BWCLID20728,LID20729wgEncodeEM002520GSM9001886.7 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5583; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksContigs; md5sum=2ac3c88ca0352bab0b285b49655a643a;
Adrenal1Alignments1AWCLID20728wgEncodeEM002520  5.1 MBbam.bai2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7769; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep1V2; md5sum=aca31b16cd476655e91f6c034d970c69;
Adrenal1Alignments1AWCLID20728wgEncodeEM002520  6.3 GBbam2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7769; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep1V2; md5sum=71e18d8da2b164f0cb71123b3161508a;
Adrenal2Alignments1BWCLID20729wgEncodeEM002520  5.2 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7762; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep2V2; md5sum=20ade5d22552cf0108de72cb83d7e631;
Adrenal2Alignments1BWCLID20729wgEncodeEM002520  7.0 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7762; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep2V2; md5sum=98b5e08df0ea73fd07244c764d8159ff;
Bladder  Transcript ENSEMBL V6530AWC,30BWCLID47030,LID47031wgEncodeEM003062GSM10005643.0 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7803; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=2e16bb15732b062764c022f04c37b421;
Bladder  Transcripts De novo30AWC,30BWCLID47030,LID47031wgEncodeEM003062GSM10005643.3 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7792; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=b45bde38e95ade07971d34cf20968b28;
Bladder1FastqRd130AWCLID47030wgEncodeEM003062GSM1000564 14 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7381; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=3acaa1bf4440adf3a7289815363ea39e;
Bladder1FastqRd230AWCLID47030wgEncodeEM003062GSM1000564 14 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7381; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=3c88deabd6306be1be02bcdd13eea3db;
Bladder1Minus Raw signal30AWCLID47030wgEncodeEM003062GSM1000564241 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7381; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksMinusRawRep1; md5sum=1d1e4565248c1f042772dcfa94880014;
Bladder1Plus Raw signal30AWCLID47030wgEncodeEM003062GSM1000564247 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7381; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksPlusRawRep1; md5sum=680b33c3c092c37fea2b731dc2466e1b;
Bladder1Spike-ins30AWCLID47030wgEncodeEM003062GSM10005641.1 GBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7818; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=23f7581fab3fbafa39eb84d722ae85f3;
Bladder2FastqRd130BWCLID47031wgEncodeEM003062GSM1000564 14 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7380; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=86470d676073ec5a9f83b428f9271562;
Bladder2Minus Raw signal30BWCLID47031wgEncodeEM003062GSM1000564218 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7380; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksMinusRawRep2; md5sum=9694d96bebb0ef3502f581b36eba0182;
Bladder2Plus Raw signal30BWCLID47031wgEncodeEM003062GSM1000564223 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7380; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksPlusRawRep2; md5sum=a9b70a01af4f1ed323dbb42ba153be72;
Bladder2Spike-ins30BWCLID47031wgEncodeEM003062GSM10005641.2 GBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7841; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=02313a3627b189726b31f2d020aed421;
Bladder  Junctions30AWC,30BWCLID47030,LID47031wgEncodeEM003062GSM1000564 14 MBbedRnaElements2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7378; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksJunctions; md5sum=821ed5573e688ff8dd89f2ac0962910c;
Bladder  Genes ENSEMBL V6530AWC,30BWCLID47030,LID47031wgEncodeEM003062GSM10005642.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7803; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=c9896eca0ea8bb404a7e65aaa6529c1b;
Bladder  Genes De Novo30AWC,30BWCLID47030,LID47031wgEncodeEM003062GSM10005642.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7792; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=f1d54a7176432b44800570bb1c75803a;
Bladder2FastqRd230BWCLID47031wgEncodeEM003062GSM1000564 14 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7380; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=3995c4129bffb0c357e267443f882ebf;
Bladder  Exons ENSEMBL V6530AWC,30BWCLID47030,LID47031wgEncodeEM003062GSM1000564 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7803; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=8e17d7ca4494bd2ea6ba9bf1ce293906;
Bladder  ExonsDenovo30AWC,30BWCLID47030,LID47031wgEncodeEM003062GSM1000564 23 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7792; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=6a46cd18b5c98a7211ecb6cfca97f1dd;
Bladder  Contigs30AWC,30BWCLID47030,LID47031wgEncodeEM003062GSM1000564 11 MBbedRnaElements2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7378; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksContigs; md5sum=84f72dcd1a3a61a39c66df1285bff466;
Bladder1Alignments30AWCLID47030wgEncodeEM003062  8.2 MBbam.bai2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7381; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep1; md5sum=2d398925ad7cfa3073615a0dbd637ce2;
Bladder1Alignments30AWCLID47030wgEncodeEM003062   22 GBbam2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7381; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep1; md5sum=1e56577882c46a2a88fc2636a12ca288;
Bladder2Alignments30BWCLID47031wgEncodeEM003062  8.1 MBbam.bai2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7380; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep2; md5sum=7e90e970c291668b83cd72eff45f7aba;
Bladder2Alignments30BWCLID47031wgEncodeEM003062   22 GBbam2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7380; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep2; md5sum=c82de56373defda5f1ac12cb0a1a7c75;
CNS  Transcript ENSEMBL V6524AWC,24BWCLID46950,LID46951wgEncodeEM003057GSM10005703.0 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7801; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=0ebf29244b42daf03d6be8977a8eb511;
CNS  Transcripts De novo24AWC,24BWCLID46950,LID46951wgEncodeEM003057GSM10005704.5 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7789; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=bfedef0c3d21e4a4fbecb5fbe4bf2e85;
CNS1Minus Raw signal21AWCLID46946wgEncodeEM003052GSM1000573248 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7388; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE11halfMinusRawRep1; md5sum=dee1c848169fc0fd7921b94cab056630;
CNS1Minus Raw signal24AWCLID46950wgEncodeEM003057GSM1000570306 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7376; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE18MinusRawRep1; md5sum=00a2b28637d4f9ee702b25c5f7345375;
CNS1Plus Raw signal21AWCLID46946wgEncodeEM003052GSM1000573249 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7388; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE11halfPlusRawRep1; md5sum=240998a1768a7ccd40aa7355612fc9f3;
CNS1Plus Raw signal24AWCLID46950wgEncodeEM003057GSM1000570307 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7376; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE18PlusRawRep1; md5sum=697b39af04afc5d99f79f807a317c6fc;
CNS1Spike-ins24AWCLID46950wgEncodeEM003057GSM1000570500 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7837; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=e80744544fd5e230e089939705923089;
CNS2Minus Raw signal21BWCLID46947wgEncodeEM003052GSM1000573342 MBbigWig2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7345; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE11halfMinusRawRep2; md5sum=7e66cef818c38ab9204c627973445e5a;
CNS2Minus Raw signal24BWCLID46951wgEncodeEM003057GSM1000570368 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7391; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE18MinusRawRep2; md5sum=b331e178cc64348e81d3d09e88e4bf95;
CNS2Plus Raw signal24BWCLID46951wgEncodeEM003057GSM1000570370 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7391; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE18PlusRawRep2; md5sum=94da2b1f3ad0c6356d2841e8c9a2b10e;
CNS2Spike-ins24BWCLID46951wgEncodeEM003057GSM1000570923 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7831; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=30b22a3bbbdd276f1290456513f902aa;
CNS  Junctions24AWC,24BWCLID46950,LID46951wgEncodeEM003057GSM1000570 16 MBbedRnaElements2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7364; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE18Junctions; md5sum=12e46a338d9af310aa204868e7f174b6;
CNS  Genes ENSEMBL V6524AWC,24BWCLID46950,LID46951wgEncodeEM003057GSM10005702.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7801; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=60cd9535d57baecb58ec3fe7573c13d8;
CNS  Genes De Novo24AWC,24BWCLID46950,LID46951wgEncodeEM003057GSM10005703.9 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7789; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=5224e72647e31d99904eec9d88f4ba27;
CNS1Alignments24AWCLID46950wgEncodeEM003057  8.2 MBbam.bai2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7376; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE18AlnRep1; md5sum=d4142934932e8ff5323cf1da3d44cf84;
CNS1Alignments24AWCLID46950wgEncodeEM003057   16 GBbam2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7376; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE18AlnRep1; md5sum=9aa4c97affc681fd59ad984aea8f024e;
CNS1FastqRd123AWCLID46948wgEncodeEM003056GSM1000569 11 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7379; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=28120752c72a6d08b63cdf2ffab3735f;
CNS1FastqRd124AWCLID46950wgEncodeEM003057GSM1000570 11 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7376; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=6cbbd0287199c1cc92e5011ddbdf5263;
CNS1FastqRd223AWCLID46948wgEncodeEM003056GSM1000569 12 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7379; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=d35c242352261daaff2a075ebc7eb198;
CNS1FastqRd224AWCLID46950wgEncodeEM003057GSM1000570 11 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7376; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=22fb050745749be3940c84359c2d9576;
CNS1Minus Raw signal23AWCLID46948wgEncodeEM003056GSM1000569316 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7379; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE14MinusRawRep1; md5sum=26d2a12f610ba9654798534703abfc78;
CNS2Alignments24BWCLID46951wgEncodeEM003057  9.1 MBbam.bai2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7391; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE18AlnRep2; md5sum=eb1cee6622d5587650dcf5e4bcf76f1d;
CNS2Alignments24BWCLID46951wgEncodeEM003057   30 GBbam2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7391; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE18AlnRep2; md5sum=0b45719c0e7e854f79cc7e4f082d5643;
CNS2FastqRd123BWCLID46949wgEncodeEM003056GSM1000569 17 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7375; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=4ac636a59203827e6a419e52f87508c5;
CNS2FastqRd124BWCLID46951wgEncodeEM003057GSM1000570 18 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7391; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=bff06141e372023d986f9f8619a6de3c;
CNS2FastqRd223BWCLID46949wgEncodeEM003056GSM1000569 17 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7375; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=563065b7f5c54c806e276d115dea435e;
CNS2FastqRd224BWCLID46951wgEncodeEM003057GSM1000570 18 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7391; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=3ffa71817b338baaf18afcf273d39b4d;
CNS  Exons ENSEMBL V6524AWC,24BWCLID46950,LID46951wgEncodeEM003057GSM1000570 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7801; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=b3b2d98c02a3431b2445c4e5215611b2;
CNS  ExonsDenovo24AWC,24BWCLID46950,LID46951wgEncodeEM003057GSM1000570 29 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7789; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=052366cb6b56ec6122597dfa46515312;
CNS  Contigs24AWC,24BWCLID46950,LID46951wgEncodeEM003057GSM1000570 14 MBbedRnaElements2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7364; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE18Contigs; md5sum=b1cc90c4be86208b7f1fc91e9c723bbe;
CNS  Transcript ENSEMBL V6523BWC,23AWCLID46949,LID46948wgEncodeEM003056GSM10005693.1 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7800; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=24b8ec9e0a9e65aee6dd6a66d1a30a60;
CNS  Transcripts De novo23BWC,23AWCLID46949,LID46948wgEncodeEM003056GSM10005695.2 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7788; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=9bb26facdddb66d054041a171142e74c;
CNS1Plus Raw signal23AWCLID46948wgEncodeEM003056GSM1000569318 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7379; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE14PlusRawRep1; md5sum=5fab715309d46b27ce82dc07e3159c97;
CNS1Spike-ins23AWCLID46948wgEncodeEM003056GSM1000569462 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7839; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=24adfc0330c9829f653c4283b6a62b29;
CNS2Minus Raw signal23BWCLID46949wgEncodeEM003056GSM1000569366 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7375; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE14MinusRawRep2; md5sum=4134d210f2c2bf14f110dfb78023107b;
CNS2Plus Raw signal23BWCLID46949wgEncodeEM003056GSM1000569367 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7375; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE14PlusRawRep2; md5sum=3c3f67ea98ee90c7afc2c275a7313306;
CNS2Spike-ins23BWCLID46949wgEncodeEM003056GSM1000569549 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7838; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=6c9301fe40f6bf7a5c852f59d751a1b8;
CNS  Junctions23AWC,23BWCLID46948,LID46949wgEncodeEM003056GSM1000569 16 MBbedRnaElements2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7361; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE14Junctions; md5sum=1dbe3f4b672c7db1cd556f0ad20669a7;
CNS  Genes ENSEMBL V6523BWC,23AWCLID46949,LID46948wgEncodeEM003056GSM10005692.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7800; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=01f13a5ec57775b1b283da21595c423e;
CNS  Genes De Novo23BWC,23AWCLID46949,LID46948wgEncodeEM003056GSM10005694.6 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7788; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=44568be9b25a79328a29e2c66bf6b440;
CNS  Exons ENSEMBL V6523BWC,23AWCLID46949,LID46948wgEncodeEM003056GSM1000569 14 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7800; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=e1fcbbb55210ba1a14cbd228f29f6161;
CNS  ExonsDenovo23BWC,23AWCLID46949,LID46948wgEncodeEM003056GSM1000569 30 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7788; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=08bec91272fa438090687cbe543f44e5;
CNS  Contigs23AWC,23BWCLID46948,LID46949wgEncodeEM003056GSM1000569 15 MBbedRnaElements2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7361; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE14Contigs; md5sum=369351fbffcc5c89ab8d6c51d74e0409;
CNS1Alignments23AWCLID46948wgEncodeEM003056  8.3 MBbam.bai2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7379; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE14AlnRep1; md5sum=f53d0cbb25ff198148727aeac4aa7989;
CNS1Alignments23AWCLID46948wgEncodeEM003056   18 GBbam2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7379; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE14AlnRep1; md5sum=0bed0472f8f1ae17bf43b5ce67d4b56b;
CNS2Alignments23BWCLID46949wgEncodeEM003056  9.5 MBbam.bai2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7375; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE14AlnRep2; md5sum=3a0c489daca0e3284e9357fac6bef2cc;
CNS2Alignments23BWCLID46949wgEncodeEM003056   27 GBbam2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7375; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE14AlnRep2; md5sum=e992f573bc1a692f81a6689759f5c62c;
CNS  Transcript ENSEMBL V6521AWC,21BWCLID46946,LID46947wgEncodeEM003052GSM10005733.1 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7799; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=6bb2ae1baa3a19b4f69c81e407a556b3;
CNS  Transcripts De novo21AWC,21BWCLID46946,LID46947wgEncodeEM003052GSM10005735.8 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7787; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=be536e0534ab15f65a2bd961933be955;
CNS1Spike-ins21AWCLID46946wgEncodeEM003052GSM1000573857 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7827; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=881674e77de4eb104f1d907999b752ef;
CNS2Plus Raw signal21BWCLID46947wgEncodeEM003052GSM1000573346 MBbigWig2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7345; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE11halfPlusRawRep2; md5sum=7f74425c13b039b868020ec4436e3ebd;
CNS2Spike-ins21BWCLID46947wgEncodeEM003052GSM1000573551 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7814; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=18835457419fb37bb80072007d57bf04;
CNS  Junctions21AWC,21BWCLID46946,LID46947wgEncodeEM003052GSM1000573 16 MBbedRnaElements2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7369; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE11halfJunctions; md5sum=913b24d24458131cbdfc99144adcda7d;
CNS  Genes ENSEMBL V6521AWC,21BWCLID46946,LID46947wgEncodeEM003052GSM10005732.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7799; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=59fca19199858b77cc603b96ad6cab5b;
CNS  Genes De Novo21AWC,21BWCLID46946,LID46947wgEncodeEM003052GSM10005735.2 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7787; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=513ec89f2e612c2fbbd027b17d6e6cb7;
CNS1FastqRd121AWCLID46946wgEncodeEM003052GSM1000573 15 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7388; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=726a712228b59952670821b3f11520f8;
CNS1FastqRd221AWCLID46946wgEncodeEM003052GSM1000573 15 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7388; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=a1b132f97d3f5e239193c89bebd5b665;
CNS2FastqRd121BWCLID46947wgEncodeEM003052GSM1000573 13 GBfastq2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7345; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=64a6e108ac892f579d22fde3cea23472;
CNS2FastqRd221BWCLID46947wgEncodeEM003052GSM1000573 13 GBfastq2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7345; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=1650cd9ace630eec3566faee7470d462;
CNS  Exons ENSEMBL V6521AWC,21BWCLID46946,LID46947wgEncodeEM003052GSM1000573 14 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7799; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=c6519a391fcc27e7682f73681c7a6298;
CNS  ExonsDenovo21AWC,21BWCLID46946,LID46947wgEncodeEM003052GSM1000573 27 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7787; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=b3fa49ff82ccdfe3a2fda5af1819a92f;
CNS  Contigs21AWC,21BWCLID46946,LID46947wgEncodeEM003052GSM1000573 13 MBbedRnaElements2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7369; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE11halfContigs; md5sum=0f4cc0aaebb54c372d4d12e1c7fb6a8f;
CNS1Alignments21AWCLID46946wgEncodeEM003052  9.1 MBbam.bai2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7388; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE11halfAlnRep1; md5sum=800a7b4012a99a9d5188692afca5929e;
CNS1Alignments21AWCLID46946wgEncodeEM003052   22 GBbam2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7388; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE11halfAlnRep1; md5sum=ec10815def5836c380635a5443dc5d4e;
CNS2Alignments21BWCLID46947wgEncodeEM003052  8.4 MBbam.bai2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7345; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE11halfAlnRep2; md5sum=90af0abc18f453db27218a7475747ba1;
CNS2Alignments21BWCLID46947wgEncodeEM003052   20 GBbam2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E11.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7345; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCnsE11halfAlnRep2; md5sum=10c9cc1bc92820852a653da98038c9fa;
Cerebellum  Transcript ENSEMBL V6520AWC,20BWCLID47036,LID47037wgEncodeEM003058GSM10005673.0 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7802; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=6f19d0915b448adb2df3dabcee52fa00;
Cerebellum  Transcripts De novo20AWC,20BWCLID47036,LID47037wgEncodeEM003058GSM10005675.6 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7790; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=a6cf1721b48f6fbe201bb20e03ead65d;
Cerebellum1Alignments20AWCLID47036wgEncodeEM003058  8.5 MBbam.bai2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7382; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep1; md5sum=ab0523339e46bb4a28c0fe5f17487c86;
Cerebellum1Alignments20AWCLID47036wgEncodeEM003058   20 GBbam2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7382; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep1; md5sum=5c76aa2f519a1ee38b23f8fb35c20e15;
Cerebellum1FastqRd120AWCLID47036wgEncodeEM003058GSM1000567 13 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7382; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=1914be2648b13bb95232eb88e1e2c943;
Cerebellum1Minus Raw signal20AWCLID47036wgEncodeEM003058GSM1000567311 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7382; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksMinusRawRep1; md5sum=3d5bef5231d2d52c89bbae40736d56e2;
Cerebellum1Plus Raw signal20AWCLID47036wgEncodeEM003058GSM1000567321 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7382; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksPlusRawRep1; md5sum=6bbd84ed0668ef40690938f9b8825de0;
Cerebellum1Spike-ins20AWCLID47036wgEncodeEM003058GSM1000567651 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7820; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=902e3a212b527c89c056610162c60cce;
Cerebellum2Alignments20BWCLID47037wgEncodeEM003058  8.1 MBbam.bai2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7367; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep2; md5sum=124fdcabd08ab1c702a18261a68b572a;
Cerebellum2Alignments20BWCLID47037wgEncodeEM003058   19 GBbam2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7367; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep2; md5sum=17096dccb2bab597886b366b12ff62e9;
Cerebellum2FastqRd120BWCLID47037wgEncodeEM003058GSM1000567 12 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7367; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=54cf5077cb0c14e3f042c7929cb6091b;
Cerebellum2Minus Raw signal20BWCLID47037wgEncodeEM003058GSM1000567296 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7367; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksMinusRawRep2; md5sum=8378f7571691ba1b61633d2006e1c615;
Cerebellum2Plus Raw signal20BWCLID47037wgEncodeEM003058GSM1000567305 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7367; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksPlusRawRep2; md5sum=d114a810a72bf1260ea8fe5cf511561a;
Cerebellum2Spike-ins20BWCLID47037wgEncodeEM003058GSM1000567823 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7828; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=00471539ce43169fb7fec701efc4b75d;
Cerebellum  Junctions20AWC,20BWCLID47036,LID47037wgEncodeEM003058GSM1000567 14 MBbedRnaElements2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7394; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksJunctions; md5sum=867927ef9581119b03842be40a4e62a7;
Cerebellum  Genes ENSEMBL V6520AWC,20BWCLID47036,LID47037wgEncodeEM003058GSM10005672.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7802; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=e277c68698d1db8b376aee7e54fbbeef;
Cerebellum  Genes De Novo20AWC,20BWCLID47036,LID47037wgEncodeEM003058GSM10005675.0 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7790; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=92bc4a7740ab461cb2fc1ce9ff83f059;
Cerebellum1FastqRd220AWCLID47036wgEncodeEM003058GSM1000567 12 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7382; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=a27041e20c8d1715edcf1cbb3871babf;
Cerebellum2FastqRd220BWCLID47037wgEncodeEM003058GSM1000567 12 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7367; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=02b47fcc3d242a19ce9b9361d939c6a1;
Cerebellum  Exons ENSEMBL V6520AWC,20BWCLID47036,LID47037wgEncodeEM003058GSM1000567 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7802; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=7cdaa171306f9218ba9de2d4cc1cbd94;
Cerebellum  ExonsDenovo20AWC,20BWCLID47036,LID47037wgEncodeEM003058GSM1000567 25 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7790; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=242618af44af7e5c5bbff028b1bdcf4d;
Cerebellum  Contigs20AWC,20BWCLID47036,LID47037wgEncodeEM003058GSM1000567 13 MBbedRnaElements2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7394; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksContigs; md5sum=5a991b1487a5f3b7af587c0019f6e45a;
Colon  Transcript ENSEMBL V6514AWC,14BWCLID21040,LID21041wgEncodeEM002512GSM9001984.8 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6290; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=8c057e052b72edeadf41e4795a5ec525;
Colon  Transcripts De novo14AWC,14BWCLID21040,LID21041wgEncodeEM002512GSM9001985.1 MBgtf2012-02-082012-11-08strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5566; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=3d0e1696fae631bf4f873f93c678ae8d;
Colon1Minus Raw signal14AWCLID21040wgEncodeEM002512GSM900198 84 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5435; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksMinusRawRep1; md5sum=7bc848d177cff8835329996ff81705d3;
Colon1Plus Raw signal14AWCLID21040wgEncodeEM002512GSM900198 85 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5435; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksPlusRawRep1; md5sum=4e806f89f5d87f7a05d2a4a04877e2f7;
Colon1Spike-ins14AWCLID21040wgEncodeEM002512GSM900198 40 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7764; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=9bdc5dffb6ccd8d704b6db165810c654;
Colon2Minus Raw signal14BWCLID21041wgEncodeEM002512GSM900198 92 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5431; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksMinusRawRep2; md5sum=70a6c5c65bc38783d5f9687571f681a4;
Colon2Plus Raw signal14BWCLID21041wgEncodeEM002512GSM900198 93 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5431; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksPlusRawRep2; md5sum=37644ed671ae2954eae640349ffd7377;
Colon2Spike-ins14BWCLID21041wgEncodeEM002512GSM900198 45 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7752; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=67b76eab201f95ba89de6a1abed19a98;
Colon  Junctions14AWC,14BWCLID21040,LID21041wgEncodeEM002512GSM9001985.7 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6215; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksJunctions; md5sum=3cc6c11a1b5805ac9391bcc80cd38e19;
Colon  Genes ENSEMBL V6514AWC,14BWCLID21040,LID21041wgEncodeEM002512GSM9001983.1 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6290; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=c6defe813b678716106fb11947eac05c;
Colon  Genes De Novo14AWC,14BWCLID21040,LID21041wgEncodeEM002512GSM9001981.4 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7077; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=9d2699b736cd43c18c62aeab190b8a93;
Colon1Alignments14AWCLID21040wgEncodeEM002512  5.2 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7764; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep1V2; md5sum=c52f09e98a97b964e7db0cc32cbf61dd;
Colon1Alignments14AWCLID21040wgEncodeEM002512  6.2 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7764; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep1V2; md5sum=ac6d22eac0e317b75ed62d967553c621;
Colon1FastqRd114AWCLID21040wgEncodeEM002512GSM9001984.0 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5435; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=3afaeac630b3fce4df99f5d9e2ac06d5;
Colon1FastqRd214AWCLID21040wgEncodeEM002512GSM9001984.1 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5435; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=70367941a5109afb4f22a71844a18917;
Colon2Alignments14BWCLID21041wgEncodeEM002512  6.5 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7752; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep2V2; md5sum=2a309ed7a8dbeedf10a82894d58657ee;
Colon2FastqRd114BWCLID21041wgEncodeEM002512GSM9001984.1 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5431; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=7a6a4225416c5e8ec623a57064440bcc;
Colon2FastqRd214BWCLID21041wgEncodeEM002512GSM9001984.2 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5431; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=65840ffefb63de108f08d99a4ba14393;
Colon  Exons ENSEMBL V6514AWC,14BWCLID21040,LID21041wgEncodeEM002512GSM900198 15 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6290; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=fb1cbf75ec4e6bbfd4b7c47c1db1ccdf;
Colon  ExonsDenovo14AWC,14BWCLID21040,LID21041wgEncodeEM002512GSM9001986.6 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7077; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=0cb7d1717523b6e0aa131f626ac39970;
Colon  Contigs14AWC,14BWCLID21040,LID21041wgEncodeEM002512GSM9001989.0 MBbedRnaElements2012-02-082012-11-08strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5566; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksContigs; md5sum=20342a4b88687d3c7fdb8fc66512e1d3;
Colon2Alignments14BWCLID21041wgEncodeEM002512  5.3 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7752; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep2V2; md5sum=0d7b0d44db0ba3a5c952664484b014d7;
Cortex  Transcript ENSEMBL V656AWC,6BWCLID47032,LID47033wgEncodeEM003063GSM10005633.0 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7805; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=46bf6c3975e61a793975d72c8eafad2d;
Cortex  Transcripts De novo6AWC,6BWCLID47032,LID47033wgEncodeEM003063GSM10005635.8 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7793; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=2ed4a41570ec815f7b993c40529b09b1;
Cortex1Alignments6AWCLID47032wgEncodeEM003063   22 GBbam2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7373; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep1; md5sum=b922885e05cbc12dc2435a2622949b52;
Cortex1FastqRd16AWCLID47032wgEncodeEM003063GSM1000563 13 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7373; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=46f690cd605fea08ec6430ab0221155c;
Cortex1FastqRd26AWCLID47032wgEncodeEM003063GSM1000563 13 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7373; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=c42a2012b27f11309c3409b96e10d129;
Cortex1Minus Raw signal6AWCLID47032wgEncodeEM003063GSM1000563323 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7373; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksMinusRawRep1; md5sum=85f5379f86b0541328258154f8b99c59;
Cortex1Plus Raw signal6AWCLID47032wgEncodeEM003063GSM1000563322 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7373; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksPlusRawRep1; md5sum=f23511a94189769c5d1abe7954073eb0;
Cortex1Spike-ins6AWCLID47032wgEncodeEM003063GSM1000563696 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7835; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=0297b695932a0ef5e976a1b7869d5a69;
Cortex2FastqRd16BWCLID47033wgEncodeEM003063GSM1000563 14 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7395; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=aae511a97e3cb028525c1d1977f7fac6;
Cortex2FastqRd26BWCLID47033wgEncodeEM003063GSM1000563 14 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7395; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=ba1e56927097dcbb30181ba996ba0a1e;
Cortex2Minus Raw signal6BWCLID47033wgEncodeEM003063GSM1000563314 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7395; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksMinusRawRep2; md5sum=2174d957fe0f6d6e80cf32960604afc5;
Cortex2Plus Raw signal6BWCLID47033wgEncodeEM003063GSM1000563313 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7395; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksPlusRawRep2; md5sum=c6196075f9f1ee252052c34c798ee46e;
Cortex2Spike-ins6BWCLID47033wgEncodeEM003063GSM1000563878 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7840; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=f6f87853661d3ea1498ec172a7001735;
Cortex  Junctions6AWC,6BWCLID47032,LID47033wgEncodeEM003063GSM1000563 14 MBbedRnaElements2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7377; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksJunctions; md5sum=6e0f41ce5b818348f63527fee2c9a90a;
Cortex  Genes ENSEMBL V656AWC,6BWCLID47032,LID47033wgEncodeEM003063GSM10005632.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7805; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=ea57a0df24636615bb09eed4b09897eb;
Cortex  Genes De Novo6AWC,6BWCLID47032,LID47033wgEncodeEM003063GSM10005635.1 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7793; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=d429167dc88e528aa23ff74b06c5a68d;
Cortex  Exons ENSEMBL V656AWC,6BWCLID47032,LID47033wgEncodeEM003063GSM1000563 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7805; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=ac01b544221990f4914b641a5faf9ef8;
Cortex  ExonsDenovo6AWC,6BWCLID47032,LID47033wgEncodeEM003063GSM1000563 23 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7793; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=2695c3ca839eba286ca3fe84ba37e7cd;
Cortex  Contigs6AWC,6BWCLID47032,LID47033wgEncodeEM003063GSM1000563 14 MBbedRnaElements2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7377; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksContigs; md5sum=97dcae6b1b5d833ee72c58bcf6e16b31;
Cortex1Alignments6AWCLID47032wgEncodeEM003063  8.3 MBbam.bai2012-07-142013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7373; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep1; md5sum=647fe56dd18769b6880b398b686d619b;
Cortex2Alignments6BWCLID47033wgEncodeEM003063  8.3 MBbam.bai2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7395; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep2; md5sum=21d255d14337d1e70e990b1ba3a51f89;
Cortex2Alignments6BWCLID47033wgEncodeEM003063   23 GBbam2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7395; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep2; md5sum=352998d9040e64fcf3a533cdebe672d1;
Duodenum  Transcript ENSEMBL V652AWC,2BWCLID20730,LID20731wgEncodeEM002521GSM9001874.5 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6334; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=1875d02e85ec999583e28b3a61cf2da6;
Duodenum  Transcripts De novo2AWC,2BWCLID20730,LID20731wgEncodeEM002521GSM9001874.3 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5573; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=38d5a701541f99ad616305c4413063fc;
Duodenum1FastqRd12AWCLID20730wgEncodeEM002521GSM9001874.6 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5491; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=b6a6dda146cc5eb910c4e84caa09e51e;
Duodenum1FastqRd22AWCLID20730wgEncodeEM002521GSM9001874.8 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5491; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=5f361f017032567043946781fb39f724;
Duodenum1Minus Raw signal2AWCLID20730wgEncodeEM002521GSM900187 59 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5491; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksMinusRawRep1; md5sum=cdd06c024a50fda791f6a3c7bd0d857a;
Duodenum1Plus Raw signal2AWCLID20730wgEncodeEM002521GSM900187 59 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5491; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksPlusRawRep1; md5sum=2d6fb3f394acffd36499cffc983bbdc5;
Duodenum1Spike-ins2AWCLID20730wgEncodeEM002521GSM900187 72 MBspikeins2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7768; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=09f71d8fb192518d6ba9073b232d499e;
Duodenum2FastqRd12BWCLID20731wgEncodeEM002521GSM9001874.7 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5498; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=f16355c343fad0ad651781e50be24fca;
Duodenum2Minus Raw signal2BWCLID20731wgEncodeEM002521GSM900187 54 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5498; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksMinusRawRep2; md5sum=43721ac85d56a586b725d8e57cf2c3e7;
Duodenum2Plus Raw signal2BWCLID20731wgEncodeEM002521GSM900187 55 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5498; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksPlusRawRep2; md5sum=6769183129211c19f85164a74796a643;
Duodenum2Spike-ins2BWCLID20731wgEncodeEM002521GSM900187 71 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7757; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=54695d9c58cea3ff595d78d32620071a;
Duodenum  Junctions2AWC,2BWCLID20730,LID20731wgEncodeEM002521GSM9001874.9 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6220; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksJunctions; md5sum=761cdc300c4ed2860085747799d7fa54;
Duodenum  Genes ENSEMBL V652AWC,2BWCLID20730,LID20731wgEncodeEM002521GSM9001873.0 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6334; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=14a89bea75852c3b168757a480c111c5;
Duodenum  Genes De Novo2AWC,2BWCLID20730,LID20731wgEncodeEM002521GSM9001871.3 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7081; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=9566883f89c209cc0d0e694c876ab5b2;
Duodenum2FastqRd22BWCLID20731wgEncodeEM002521GSM9001875.0 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5498; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=5642b1c402e5487ebdd6288c0debc081;
Duodenum  Exons ENSEMBL V652AWC,2BWCLID20730,LID20731wgEncodeEM002521GSM900187 15 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6334; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=14296caaee2ffd8581653ceed5f080a4;
Duodenum  ExonsDenovo2AWC,2BWCLID20730,LID20731wgEncodeEM002521GSM9001875.1 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7081; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=faeddc99361bb491f2e3593f4eb0bd1f;
Duodenum  Contigs2AWC,2BWCLID20730,LID20731wgEncodeEM002521GSM9001876.3 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5573; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksContigs; md5sum=0ec70db66a371fdcd72081e9bf8641c2;
Duodenum1Alignments2AWCLID20730wgEncodeEM002521  5.2 MBbam.bai2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7768; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksAlnRep1V2; md5sum=9ce9cc98e4499b5c3885d0a8f92d7fa6;
Duodenum1Alignments2AWCLID20730wgEncodeEM002521  6.7 GBbam2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7768; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksAlnRep1V2; md5sum=65d650988e871776098cc5059b215cc8;
Duodenum2Alignments2BWCLID20731wgEncodeEM002521  5.1 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7757; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksAlnRep2V2; md5sum=be316bd4e0415a47bf506ecad1982154;
Duodenum2Alignments2BWCLID20731wgEncodeEM002521  6.7 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7757; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksAlnRep2V2; md5sum=2aa0d6e1403ddad084d5e8efff88f22d;
Frontal Lobe  Transcript ENSEMBL V657BWC,7AWCLID47082,LID47081wgEncodeEM003064GSM10005623.0 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7782; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=c388470cdc2b9e79fc57f15e5106d7e0;
Frontal Lobe  Transcripts De novo7BWC,7AWCLID47082,LID47081wgEncodeEM003064GSM10005625.9 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7783; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=d6676e3ffbe38f8ba0eaa0ca2ed40ec7;
Frontal Lobe1Alignments7AWCLID47081wgEncodeEM003064  9.1 MBbam.bai2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7393; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksAlnRep1; md5sum=abad794ce548de5438a13f4de1ec38e9;
Frontal Lobe1Alignments7AWCLID47081wgEncodeEM003064   26 GBbam2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7393; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksAlnRep1; md5sum=8d978ff1b86d45b1480703e7a541f8da;
Frontal Lobe1FastqRd17AWCLID47081wgEncodeEM003064GSM1000562 16 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7393; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=20e60f95a5f1fad38556fbd9da5dafe8;
Frontal Lobe1Minus Raw signal7AWCLID47081wgEncodeEM003064GSM1000562372 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7393; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksMinusRawRep1; md5sum=01fe0a11235eff91a67506fccee0b761;
Frontal Lobe1Plus Raw signal7AWCLID47081wgEncodeEM003064GSM1000562372 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7393; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksPlusRawRep1; md5sum=3d824109e600913c8125b3c32abf664c;
Frontal Lobe1Spike-ins7AWCLID47081wgEncodeEM003064GSM1000562792 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7836; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=d31fccd5c15fa17ce20b99e3d56a63bd;
Frontal Lobe2Alignments7BWCLID47082wgEncodeEM003064  8.5 MBbam.bai2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7385; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksAlnRep2; md5sum=24cf45d1792e85f6c8efebf92ad1176a;
Frontal Lobe2Alignments7BWCLID47082wgEncodeEM003064   20 GBbam2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7385; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksAlnRep2; md5sum=136904a664ab73e47d333ab23be4e255;
Frontal Lobe2FastqRd17BWCLID47082wgEncodeEM003064GSM1000562 13 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7385; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=4c2cfecca923c5aee35d6eae419eab95;
Frontal Lobe2Minus Raw signal7BWCLID47082wgEncodeEM003064GSM1000562314 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7385; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksMinusRawRep2; md5sum=bc4aa0bca59116d1e0b0c73efa5555eb;
Frontal Lobe2Plus Raw signal7BWCLID47082wgEncodeEM003064GSM1000562314 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7385; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksPlusRawRep2; md5sum=cbcce29f57178937b330dfe2413ff8c6;
Frontal Lobe2Spike-ins7BWCLID47082wgEncodeEM003064GSM1000562599 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7823; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=a9a47e563980301994e3c6a1f588dc6e;
Frontal Lobe  Junctions7AWC,7BWCLID47081,LID47082wgEncodeEM003064GSM1000562 16 MBbedRnaElements2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7384; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksJunctions; md5sum=7f4063d395d5e42f9237cad21b5b389b;
Frontal Lobe  Genes ENSEMBL V657BWC,7AWCLID47082,LID47081wgEncodeEM003064GSM10005622.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7782; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=d76ab2a4da68ba6c498b5e69eec9a220;
Frontal Lobe  Genes De Novo7BWC,7AWCLID47082,LID47081wgEncodeEM003064GSM10005625.2 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7783; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=6dacc424b67f28d43a4a1d3c403cf9dd;
Frontal Lobe1FastqRd27AWCLID47081wgEncodeEM003064GSM1000562 15 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7393; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=9d67f578cc4cd46c2784f35e00d780ff;
Frontal Lobe2FastqRd27BWCLID47082wgEncodeEM003064GSM1000562 12 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7385; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=2b27fb081e4b9152576f498c6f2946af;
Frontal Lobe  Exons ENSEMBL V657BWC,7AWCLID47082,LID47081wgEncodeEM003064GSM1000562 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7782; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=11931d21569a038bd8f0355a9d5119a5;
Frontal Lobe  ExonsDenovo7BWC,7AWCLID47082,LID47081wgEncodeEM003064GSM1000562 28 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7783; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=71ccd09cd4d5a06609c08b27d8e465a2;
Frontal Lobe  Contigs7AWC,7BWCLID47081,LID47082wgEncodeEM003064GSM1000562 15 MBbedRnaElements2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7384; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksContigs; md5sum=07fe86db92bb3a24dc2a159a48df733c;
Genital Fat Pad  Transcript ENSEMBL V654AWC,4BWCLID21179,LID21180wgEncodeEM002522GSM9001905.0 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6338; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=e0aecf9647d85c1891ad760865138c31;
Genital Fat Pad  Transcripts De novo4AWC,4BWCLID21179,LID21180wgEncodeEM002522GSM9001905.9 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5577; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=95cd9b855546297b7a11ffb2e450c5ec;
Genital Fat Pad1Alignments4AWCLID21179wgEncodeEM002522  5.9 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7742; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep1V2; md5sum=c1b05a11d05159d75c6101f2b2368390;
Genital Fat Pad1Alignments4AWCLID21179wgEncodeEM002522  7.4 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7742; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep1V2; md5sum=1c5d42054b25685a884ec34bd988c773;
Genital Fat Pad1FastqRd14AWCLID21179wgEncodeEM002522GSM9001904.3 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5482; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=91f72053ffa030d9dc1d2a594d1cf11e;
Genital Fat Pad1Minus Raw signal4AWCLID21179wgEncodeEM002522GSM900190127 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5482; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksMinusRawRep1; md5sum=99fa16bd5fdb26d9514b916dc38ee49f;
Genital Fat Pad1Plus Raw signal4AWCLID21179wgEncodeEM002522GSM900190128 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5482; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksPlusRawRep1; md5sum=3da1307ef55cc40ec9c6dbec6c9ff774;
Genital Fat Pad1Spike-ins4AWCLID21179wgEncodeEM002522GSM900190125 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7742; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=a765d40f1f0098b127d3daabcb1f17ea;
Genital Fat Pad2Minus Raw signal4BWCLID21180wgEncodeEM002522GSM900190144 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5488; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksMinusRawRep2; md5sum=3795087c89a3076b6d8cb5dd05a801ef;
Genital Fat Pad2Plus Raw signal4BWCLID21180wgEncodeEM002522GSM900190145 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5488; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksPlusRawRep2; md5sum=7e819d69ba8cee9679a89daa99bbb870;
Genital Fat Pad2Spike-ins4BWCLID21180wgEncodeEM002522GSM900190123 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7765; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=0e4a7b92e36e48fb3b1e5c6f4207ceaa;
Genital Fat Pad  Junctions4AWC,4BWCLID21179,LID21180wgEncodeEM002522GSM9001907.3 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6223; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksJunctions; md5sum=92f9ad241d997357d5a15cbe806c9d33;
Genital Fat Pad  Genes ENSEMBL V654AWC,4BWCLID21179,LID21180wgEncodeEM002522GSM9001903.2 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6338; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=2b790e984484b3298264dac1ce77a9e4;
Genital Fat Pad  Genes De Novo4AWC,4BWCLID21179,LID21180wgEncodeEM002522GSM9001901.6 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7086; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=58122dd434f652157a5949e73a37bd36;
Genital Fat Pad1FastqRd24AWCLID21179wgEncodeEM002522GSM9001904.8 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5482; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=dfa139e72dd05736e3c923a34227d7c8;
Genital Fat Pad2FastqRd14BWCLID21180wgEncodeEM002522GSM9001905.3 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5488; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=d48517835dd09c894cdfe2f23945677d;
Genital Fat Pad2FastqRd24BWCLID21180wgEncodeEM002522GSM9001905.6 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5488; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=ba563d89b4cd464ff778ab8268210b16;
Genital Fat Pad  Exons ENSEMBL V654AWC,4BWCLID21179,LID21180wgEncodeEM002522GSM900190 16 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6338; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=ebfb6faa82e161cfb5159695e157009b;
Genital Fat Pad  ExonsDenovo4AWC,4BWCLID21179,LID21180wgEncodeEM002522GSM9001907.5 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7086; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=17e2a47c03bbb627af0d685e7ccecf3c;
Genital Fat Pad  Contigs4AWC,4BWCLID21179,LID21180wgEncodeEM002522GSM900190 14 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5577; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksContigs; md5sum=8b79327eab7639c6ee68a0a74df5219c;
Genital Fat Pad2Alignments4BWCLID21180wgEncodeEM002522  6.1 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7765; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep2V2; md5sum=fd724eca2a932817f1b9775b44cd8eb6;
Genital Fat Pad2Alignments4BWCLID21180wgEncodeEM002522  9.0 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7765; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep2V2; md5sum=9741b96f1fc94fb373a393caf105789b;
Heart  Transcript ENSEMBL V6516AWC,16BWCLID20870,LID20871wgEncodeEM002513GSM9001994.7 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6332; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=6961a598b6419ae2e415cc851ac02ef9;
Heart  Transcripts De novo16AWC,16BWCLID20870,LID20871wgEncodeEM002513GSM9001994.9 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5570; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=8b247f8dd38c887b20df1bdfd832b86d;
Heart1Minus Raw signal16AWCLID20870wgEncodeEM002513GSM900199 97 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5426; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksMinusRawRep1; md5sum=205e7438d74163c6a5f6190af76f6419;
Heart1Plus Raw signal16AWCLID20870wgEncodeEM002513GSM900199 97 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5426; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksPlusRawRep1; md5sum=51f4e544dc5aceb5f1e74544164a8ef6;
Heart1Spike-ins16AWCLID20870wgEncodeEM002513GSM900199116 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7760; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=27bf14376f6233ff5dc74805c1fa1a7f;
Heart2Minus Raw signal16BWCLID20871wgEncodeEM002513GSM900199 89 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5427; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksMinusRawRep2; md5sum=c5bfb863450d323bbaec288e364fdd8f;
Heart2Plus Raw signal16BWCLID20871wgEncodeEM002513GSM900199 89 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5427; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksPlusRawRep2; md5sum=9a7d8de8e891746ee59895dacd201685;
Heart2Spike-ins16BWCLID20871wgEncodeEM002513GSM900199120 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7761; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=d706868efd157e532006edd3a7ce2340;
Heart  Junctions16BWC,16AWCLID20871,LID20870wgEncodeEM002513GSM9001995.3 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6217; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksJunctions; md5sum=6f2d835c42f573315cf1426ad66c74a6;
Heart  Genes ENSEMBL V6516AWC,16BWCLID20870,LID20871wgEncodeEM002513GSM9001993.1 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6332; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=5f555fcf675fa00f399f0c8172559b60;
Heart  Genes De Novo16AWC,16BWCLID20870,LID20871wgEncodeEM002513GSM9001991.2 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7078; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=7c9d7a9da96af9c33cc9f712e23f69a0;
Heart1FastqRd116AWCLID20870wgEncodeEM002513GSM9001994.9 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5426; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=1b15710857386289e39a93e06bc4ffda;
Heart1FastqRd216AWCLID20870wgEncodeEM002513GSM9001995.0 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5426; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=7bb9c1c323d2fa66d01fbecee3c4443d;
Heart2FastqRd116BWCLID20871wgEncodeEM002513GSM9001995.1 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5427; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=3b52ac1a78c39ad11973479e2b023b4e;
Heart2FastqRd216BWCLID20871wgEncodeEM002513GSM9001995.3 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5427; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=2d306eeedf9e29bac05a2c729b809fdf;
Heart  Exons ENSEMBL V6516AWC,16BWCLID20870,LID20871wgEncodeEM002513GSM900199 15 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6332; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=9d7b9290965c427997b933742802aa69;
Heart  ExonsDenovo16AWC,16BWCLID20870,LID20871wgEncodeEM002513GSM9001996.6 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7078; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=837fec4e2824a5c18b3ebce81a2f9a57;
Heart  Contigs16AWC,16BWCLID20870,LID20871wgEncodeEM002513GSM90019910.0 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5570; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksContigs; md5sum=4a9293e7a85115664e2c6e95f09293d6;
Heart1Alignments16AWCLID20870wgEncodeEM002513  5.4 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7760; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep1V2; md5sum=0c95e76721434894adc078355c28af74;
Heart1Alignments16AWCLID20870wgEncodeEM002513  8.8 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7760; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep1V2; md5sum=fbf73a02c04e8945e6e5e2a157347e2f;
Heart2Alignments16BWCLID20871wgEncodeEM002513  5.4 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7761; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep2V2; md5sum=3181b24b054c4eff4230985b0392b515;
Heart2Alignments16BWCLID20871wgEncodeEM002513  8.9 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7761; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep2V2; md5sum=676e205dcd796f0dd719934c3505b114;
Kidney  Transcript ENSEMBL V6517AWC,17BWCLID20872,LID20873wgEncodeEM002514GSM9001944.9 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6331; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=2597a679d805876fb4dc268615a0b10f;
Kidney  Transcripts De novo17AWC,17BWCLID20872,LID20873wgEncodeEM002514GSM9001945.6 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5571; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=3626cad061360b5058bbfacca1795f11;
Kidney1FastqRd117AWCLID20872wgEncodeEM002514GSM9001946.1 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5434; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=2214d6a0e51c95aad832d2bb51016d11;
Kidney1FastqRd217AWCLID20872wgEncodeEM002514GSM9001946.3 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5434; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=bb1dab3f9b60e000da692a3d68f10a00;
Kidney1Minus Raw signal17AWCLID20872wgEncodeEM002514GSM900194126 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5434; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksMinusRawRep1; md5sum=2a2b36fec9e5314d4dade0c8d77fd992;
Kidney1Plus Raw signal17AWCLID20872wgEncodeEM002514GSM900194128 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5434; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksPlusRawRep1; md5sum=026962055c414f4a1a0752297bcce6ed;
Kidney1Spike-ins17AWCLID20872wgEncodeEM002514GSM900194121 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7756; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=40cee97763f71840eacea910693ef0df;
Kidney2Minus Raw signal17BWCLID20873wgEncodeEM002514GSM900194126 MBbigWig2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5439; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksMinusRawRep2; md5sum=1c1ec52e5a484aa64c5eb50d30be01a1;
Kidney2Plus Raw signal17BWCLID20873wgEncodeEM002514GSM900194128 MBbigWig2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5439; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksPlusRawRep2; md5sum=b80f74b92ea7ff9fb3e07a209eb8079e;
Kidney2Spike-ins17BWCLID20873wgEncodeEM002514GSM900194216 MBspikeins2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7774; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=906380cce3a4bdc72580238af2928c5e;
Kidney  Junctions17AWC,17BWCLID20872,LID20873wgEncodeEM002514GSM9001947.0 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6216; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksJunctions; md5sum=16b128730f15ec29f9b749a2c03b6e50;
Kidney  Genes ENSEMBL V6517AWC,17BWCLID20872,LID20873wgEncodeEM002514GSM9001943.1 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6331; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=8f9659433e75ac724b0e0398aeffcb83;
Kidney  Genes De Novo17AWC,17BWCLID20872,LID20873wgEncodeEM002514GSM9001941.5 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7079; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=2ee211275bafaf49b2eea4f6f1b641bd;
Kidney2FastqRd117BWCLID20873wgEncodeEM002514GSM9001947.5 GBfastq.tgz2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5439; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=3c65d78b048edb27c591b34aad41008a;
Kidney2FastqRd217BWCLID20873wgEncodeEM002514GSM9001947.9 GBfastq.tgz2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5439; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=a5965f087919f404eeaf41ad1454dbf4;
Kidney  Exons ENSEMBL V6517AWC,17BWCLID20872,LID20873wgEncodeEM002514GSM900194 15 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6331; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=bcf22230507beec250962a1651bd700e;
Kidney  ExonsDenovo17AWC,17BWCLID20872,LID20873wgEncodeEM002514GSM9001947.2 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7079; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=64d717035b50a79435f95616a1b938e6;
Kidney  Contigs17AWC,17BWCLID20872,LID20873wgEncodeEM002514GSM900194 13 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5571; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksContigs; md5sum=3c22f2812358f6eb7a5d7d8e91da8e09;
Kidney1Alignments17AWCLID20872wgEncodeEM002514  6.0 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7756; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep1V2; md5sum=7875a185bf39f700ab0b8c6ee2c065fc;
Kidney1Alignments17AWCLID20872wgEncodeEM002514  9.9 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7756; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep1V2; md5sum=e3e141f50c6d15ebcd22218a7d8bb2f1;
Kidney2Alignments17BWCLID20873wgEncodeEM002514  6.0 MBbam.bai2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7774; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep2V2; md5sum=c257fc2f1434e9413b04d391fca8600c;
Kidney2Alignments17BWCLID20873wgEncodeEM002514   12 GBbam2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7774; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep2V2; md5sum=c5bfa1248e1b5fec7c0038aaea1e97a6;
Large Intestine  Transcript ENSEMBL V658AWC,8BWCLID21183,LID21184wgEncodeEM002523GSM9001894.8 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6345; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=8e0543ab6e23a66de9bc5e411200de63;
Large Intestine  Transcripts De novo8AWC,8BWCLID21183,LID21184wgEncodeEM002523GSM9001895.1 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5585; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=9882762d255ba9f5e6ebeebd1a32410f;
Large Intestine1Alignments8AWCLID21183wgEncodeEM002523  5.7 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7755; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep1V2; md5sum=60e0e68cc5b6b814a964de725c4c4dff;
Large Intestine1Alignments8AWCLID21183wgEncodeEM002523  7.8 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7755; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep1V2; md5sum=30805742209beb58a0a50db5c3aaf77f;
Large Intestine1Minus Raw signal8AWCLID21183wgEncodeEM002523GSM900189112 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5494; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksMinusRawRep1; md5sum=3a5ccc2e6841270ef2830abd723ba96c;
Large Intestine1Plus Raw signal8AWCLID21183wgEncodeEM002523GSM900189113 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5494; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksPlusRawRep1; md5sum=63b99bb0535d3a9f09eb83757fdad8fe;
Large Intestine1Spike-ins8AWCLID21183wgEncodeEM002523GSM900189164 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7755; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=2c070d2f3a7a164bf89bac13dd2a983d;
Large Intestine2Alignments8BWCLID21184wgEncodeEM002523  8.3 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7766; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep2V2; md5sum=5e74154e358700b85889b88cad1dcd32;
Large Intestine2Minus Raw signal8BWCLID21184wgEncodeEM002523GSM900189 95 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5490; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksMinusRawRep2; md5sum=d095346ce6d5d3b0870441df00993a58;
Large Intestine2Plus Raw signal8BWCLID21184wgEncodeEM002523GSM900189 96 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5490; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksPlusRawRep2; md5sum=12100c43ec5b1d8797a5b8ba50488619;
Large Intestine2Spike-ins8BWCLID21184wgEncodeEM002523GSM900189294 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7766; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=8c406a3f1555e41cb0f5e112a91838e3;
Large Intestine  Junctions8AWC,8BWCLID21183,LID21184wgEncodeEM002523GSM9001896.3 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6231; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksJunctions; md5sum=aae13caef095f745fa2278ec969a31c3;
Large Intestine  Genes ENSEMBL V658AWC,8BWCLID21183,LID21184wgEncodeEM002523GSM9001893.1 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6345; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=4c22100a86e2efbe64d1a39b41f09feb;
Large Intestine  Genes De Novo8AWC,8BWCLID21183,LID21184wgEncodeEM002523GSM9001891.3 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7092; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=1b287e2afda0124af62a98b00e696852;
Large Intestine1FastqRd18AWCLID21183wgEncodeEM002523GSM9001894.7 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5494; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=aeea52fabe75532647fe580491c7a73f;
Large Intestine1FastqRd28AWCLID21183wgEncodeEM002523GSM9001895.0 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5494; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=ecd6581bf7414c7de40bdd46eb0e4a0e;
Large Intestine2FastqRd18BWCLID21184wgEncodeEM002523GSM9001895.1 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5490; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=de51e70525556f80d3e62e4d3687e53a;
Large Intestine2FastqRd28BWCLID21184wgEncodeEM002523GSM9001895.4 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5490; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=a557800cc25b66a6cebf62f00a7b1573;
Large Intestine  Exons ENSEMBL V658AWC,8BWCLID21183,LID21184wgEncodeEM002523GSM900189 15 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6345; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=068b469280518836bf8ba3602e298228;
Large Intestine  ExonsDenovo8AWC,8BWCLID21183,LID21184wgEncodeEM002523GSM9001896.9 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7092; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=88cc1fc5eeef30bdf414cb3a6773be8b;
Large Intestine  Contigs8AWC,8BWCLID21183,LID21184wgEncodeEM002523GSM900189 10 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5585; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksContigs; md5sum=8ca0277e072157c5f0cde745dc4144c1;
Large Intestine2Alignments8BWCLID21184wgEncodeEM002523  5.6 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7766; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep2V2; md5sum=53b556f242133deb16339ccbb091aa9a;
Limb  Transcript ENSEMBL V6529AWC,29BWCLID46985,LID46986wgEncodeEM003059GSM10005683.0 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7807; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=7fcc49eddc4f6205dc8a382be09f3750;
Limb  Transcripts De novo29AWC,29BWCLID46985,LID46986wgEncodeEM003059GSM10005685.1 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7795; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=3a8e7fa300cc17a4e04d779b2895c0f0;
Limb1Alignments29AWCLID46985wgEncodeEM003059  8.2 MBbam.bai2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7362; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLimbE14halfAlnRep1; md5sum=2dbd47480c67ca5be0bdd7d870eba659;
Limb1Alignments29AWCLID46985wgEncodeEM003059   20 GBbam2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7362; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLimbE14halfAlnRep1; md5sum=a2880eb12fd37d458eea5ee758d9bd30;
Limb1Minus Raw signal29AWCLID46985wgEncodeEM003059GSM1000568286 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7362; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLimbE14halfMinusRawRep1; md5sum=1fe6bfa73214a0e5cf5f7733884a10c1;
Limb1Plus Raw signal29AWCLID46985wgEncodeEM003059GSM1000568291 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7362; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLimbE14halfPlusRawRep1; md5sum=039c4d802f4c0382016c37d3ba2627ec;
Limb1Spike-ins29AWCLID46985wgEncodeEM003059GSM1000568724 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7821; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=6ba32b7cd63cc53d8c1beae30edb403d;
Limb2Minus Raw signal29BWCLID46986wgEncodeEM003059GSM1000568248 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7374; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLimbE14halfMinusRawRep2; md5sum=b70a6e63c9983c071fda4a2e243ebdd7;
Limb2Plus Raw signal29BWCLID46986wgEncodeEM003059GSM1000568253 MBbigWig2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7374; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLimbE14halfPlusRawRep2; md5sum=d4694ce83e8b772b5fef086893ba2a03;
Limb2Spike-ins29BWCLID46986wgEncodeEM003059GSM1000568850 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7834; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=c4a294abb6281f50344044df7de114da;
Limb  Junctions29AWC,29BWCLID46985,LID46986wgEncodeEM003059GSM1000568 15 MBbedRnaElements2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7387; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLimbE14halfJunctions; md5sum=744349ef7d3f0a39e5d22a27fb0517d4;
Limb  Genes ENSEMBL V6529AWC,29BWCLID46985,LID46986wgEncodeEM003059GSM10005682.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7807; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=8e4937b929e540c55933fbbfd22e0c72;
Limb  Genes De Novo29AWC,29BWCLID46985,LID46986wgEncodeEM003059GSM10005684.4 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7795; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=24b3fcb556e2988d37cd7a60c473ab7d;
Limb1FastqRd129AWCLID46985wgEncodeEM003059GSM1000568 12 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7362; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=a9bee3a621217576bf40cee6540c2bb4;
Limb1FastqRd229AWCLID46985wgEncodeEM003059GSM1000568 13 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7362; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=28067e0c8fc1905858a5770cd9e54c8e;
Limb2FastqRd129BWCLID46986wgEncodeEM003059GSM1000568 12 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7374; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=bf745b0a1ed857b246ecb2b929b5dc0c;
Limb2FastqRd229BWCLID46986wgEncodeEM003059GSM1000568 13 GBfastq2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7374; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=06e20e9914ffcc60519acb110c142668;
Limb  Exons ENSEMBL V6529AWC,29BWCLID46985,LID46986wgEncodeEM003059GSM1000568 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7807; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=9768315277f3b7ec92c568f3993fb135;
Limb  ExonsDenovo29AWC,29BWCLID46985,LID46986wgEncodeEM003059GSM1000568 25 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7795; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=be3b5e9a791b7ca40465f7167596973e;
Limb  Contigs29AWC,29BWCLID46985,LID46986wgEncodeEM003059GSM1000568 13 MBbedRnaElements2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7387; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLimbE14halfContigs; md5sum=4e210c3c61e061982c06fe1ca30dfd4c;
Limb2Alignments29BWCLID46986wgEncodeEM003059  8.2 MBbam.bai2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7374; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLimbE14halfAlnRep2; md5sum=563baf30e3de82a249683dd37cd598d2;
Limb2Alignments29BWCLID46986wgEncodeEM003059   19 GBbam2012-07-142013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7374; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLimbE14halfAlnRep2; md5sum=53e19cef514a5fb90ae941a17d2cc719;
Liver  Transcript ENSEMBL V6527BWC,27AWCLID47149,LID47148wgEncodeEM003060GSM10005662.9 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7797; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=83c1a975751771ec8080497d22177930;
Liver  Transcripts De novo27BWC,27AWCLID47149,LID47148wgEncodeEM003060GSM10005662.8 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7786; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=74a64754f668903659d8e05643ec0ab2;
Liver1Alignments28AWCLID47146wgEncodeEM003054   11 MBbam.bai2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7363; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14halfAlnRep1; md5sum=24488af32b07bfa0e70fcb85d60439be;
Liver1Alignments28AWCLID47146wgEncodeEM003054   22 GBbam2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7363; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14halfAlnRep1; md5sum=c2a131ed1fd552c6ce3e539473df274e;
Liver1FastqRd126AWCLID47144wgEncodeEM003053GSM1000574 10 GBfastq2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7343; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=f74d86349b5ecdcbcad08f0952bd0ef4;
Liver1FastqRd128AWCLID47146wgEncodeEM003054GSM1000571 12 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7363; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=80f7a42197b9fe8fae5542ff5bcdc4ef;
Liver1FastqRd226AWCLID47144wgEncodeEM003053GSM1000574 10 GBfastq2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7343; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=35a40a38e8782909cb1df8266542e3ab;
Liver1Minus Raw signal26AWCLID47144wgEncodeEM003053GSM1000574171 MBbigWig2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7343; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14MinusRawRep1; md5sum=c8b93c60c814e90912efce146e909ae3;
Liver1Minus Raw signal27AWCLID47148wgEncodeEM003060GSM1000566193 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7390; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE18MinusRawRep1; md5sum=c5bb312adfeaac4c60a9f7ffc7bf4536;
Liver1Minus Raw signal28AWCLID47146wgEncodeEM003054GSM1000571178 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7363; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14halfMinusRawRep1; md5sum=c22484ab53a136c7b124fd4e7e2004bf;
Liver1Plus Raw signal26AWCLID47144wgEncodeEM003053GSM1000574174 MBbigWig2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7343; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14PlusRawRep1; md5sum=41d31f5617ab64bcdc89531884748446;
Liver1Plus Raw signal27AWCLID47148wgEncodeEM003060GSM1000566195 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7390; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE18PlusRawRep1; md5sum=8375281c206a60cc3b90eb7bf1779785;
Liver1Plus Raw signal28AWCLID47146wgEncodeEM003054GSM1000571181 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7363; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14halfPlusRawRep1; md5sum=1de3e3566ea87553e9da5115c9ca9eea;
Liver1Spike-ins26AWCLID47144wgEncodeEM003053GSM1000574566 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7819; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=502348ae2a26485ab3ab6b601356c498;
Liver1Spike-ins27AWCLID47148wgEncodeEM003060GSM1000566771 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7830; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=5cae8256d9884f2e69f9df7da6f4a6b5;
Liver1Spike-ins28AWCLID47146wgEncodeEM003054GSM1000571500 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7822; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=a6b33f8ff1689e56a59f3b7111ba760f;
Liver2Alignments28BWCLID47147wgEncodeEM003054  9.3 MBbam.bai2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7366; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14halfAlnRep2; md5sum=972640b0002c40ca2a2ca0e281db484e;
Liver2Alignments28BWCLID47147wgEncodeEM003054   14 GBbam2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7366; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14halfAlnRep2; md5sum=62b7cdd80db0759e8ecd685bb4414ed9;
Liver2FastqRd126BWCLID47145wgEncodeEM003053GSM1000574 17 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7371; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=1623536610493855c047e3bcb69ec4b3;
Liver2FastqRd128BWCLID47147wgEncodeEM003054GSM10005717.1 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7366; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=eae544791a025c2df592543f86f2553f;
Liver2Minus Raw signal26BWCLID47145wgEncodeEM003053GSM1000574204 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7371; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14MinusRawRep2; md5sum=7fbc52890656a674b4b88c2fb9b6e243;
Liver2Minus Raw signal27BWCLID47149wgEncodeEM003060GSM1000566191 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7372; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE18MinusRawRep2; md5sum=21c2f3653b1094fe7b8043e340358796;
Liver2Plus Raw signal27BWCLID47149wgEncodeEM003060GSM1000566193 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7372; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE18PlusRawRep2; md5sum=004f05247d200853f647a776a5aff3a9;
Liver2Spike-ins27BWCLID47149wgEncodeEM003060GSM1000566488 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7833; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=928705d95f216a5358d9d2d95ddd832e;
Liver  Junctions27AWC,27BWCLID47148,LID47149wgEncodeEM003060GSM1000566 14 MBbedRnaElements2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7392; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE18Junctions; md5sum=54a534146b39a0ca0831db239582faa8;
Liver  Genes ENSEMBL V6527BWC,27AWCLID47149,LID47148wgEncodeEM003060GSM10005662.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7797; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=6b91378a4c3b810774f3c9ab6c678452;
Liver  Genes De Novo27BWC,27AWCLID47149,LID47148wgEncodeEM003060GSM10005662.2 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7786; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=b252274f9e60a936b47322d2c8bae96c;
Liver1FastqRd127AWCLID47148wgEncodeEM003060GSM1000566 18 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7390; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=85d9a62c0a15844dee053f345c0697ef;
Liver1FastqRd227AWCLID47148wgEncodeEM003060GSM1000566 18 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7390; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=2ef47e3060fd33228d4ce10e2ea888e3;
Liver2FastqRd127BWCLID47149wgEncodeEM003060GSM1000566 15 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7372; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=cc520400b8858eff18ac3844f3355986;
Liver2FastqRd227BWCLID47149wgEncodeEM003060GSM1000566 14 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7372; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=8fced00146c91085b6ffbe8d87de6661;
Liver  Exons ENSEMBL V6527BWC,27AWCLID47149,LID47148wgEncodeEM003060GSM1000566 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7797; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=84851c078bfc9df747dfb665c14d32fd;
Liver  ExonsDenovo27BWC,27AWCLID47149,LID47148wgEncodeEM003060GSM1000566 23 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7786; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=3262fc16db2e7d67ee882292986607d3;
Liver  Contigs27AWC,27BWCLID47148,LID47149wgEncodeEM003060GSM1000566 11 MBbedRnaElements2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7392; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE18Contigs; md5sum=fc92f89953ae255f8adf871800d08ab2;
Liver1Alignments27AWCLID47148wgEncodeEM003060   10 MBbam.bai2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7390; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE18AlnRep1; md5sum=ddc82e1de8622670a957e144f7958fbc;
Liver1Alignments27AWCLID47148wgEncodeEM003060   31 GBbam2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7390; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE18AlnRep1; md5sum=7d3d674ca696aa50f9fc41815af15665;
Liver2Alignments27BWCLID47149wgEncodeEM003060  9.1 MBbam.bai2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7372; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE18AlnRep2; md5sum=a29a803d19fe0bb095bdfe968cd8cc8f;
Liver2Alignments27BWCLID47149wgEncodeEM003060   25 GBbam2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E18; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7372; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE18AlnRep2; md5sum=034f491f68817e59d3f21f89d93eb13e;
Liver  Transcript ENSEMBL V6528AWC,28BWCLID47146,LID47147wgEncodeEM003054GSM10005712.9 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7796; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=be3f7b48a297ce9f35eefeedcea5903e;
Liver  Transcripts De novo28AWC,28BWCLID47146,LID47147wgEncodeEM003054GSM10005712.6 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7785; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=d6d48ee95f4649618e309dbd2fd0fd79;
Liver2Minus Raw signal28BWCLID47147wgEncodeEM003054GSM1000571130 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7366; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14halfMinusRawRep2; md5sum=adcffae7ed8be3a31ca616e042312436;
Liver2Plus Raw signal26BWCLID47145wgEncodeEM003053GSM1000574207 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7371; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14PlusRawRep2; md5sum=83c372754f38d7ef8dce5f0d81cfa822;
Liver2Plus Raw signal28BWCLID47147wgEncodeEM003054GSM1000571132 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7366; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14halfPlusRawRep2; md5sum=96f7ee17cdefe684ef11402fd4dd2bb2;
Liver2Spike-ins26BWCLID47145wgEncodeEM003053GSM1000574868 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7832; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=fa22f214e962d2215094d55901410e91;
Liver2Spike-ins28BWCLID47147wgEncodeEM003054GSM1000571211 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7825; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=3480748bbc622a6c6b9dee31ccd1b6ae;
Liver  Junctions28AWC,28BWCLID47146,LID47147wgEncodeEM003054GSM1000571 12 MBbedRnaElements2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7344; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14halfJunctions; md5sum=57087d452ce994056b4015ea9fad388d;
Liver  Genes ENSEMBL V6528AWC,28BWCLID47146,LID47147wgEncodeEM003054GSM10005712.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7796; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=8bd3bf0ef2a4dec6f40dfc854b5f8a78;
Liver  Genes De Novo28AWC,28BWCLID47146,LID47147wgEncodeEM003054GSM10005712.1 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7785; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=da96b265940b9739e7d36f7e1dc1b09b;
Liver1FastqRd228AWCLID47146wgEncodeEM003054GSM1000571 12 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7363; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=a43f4614b2068eaed0cf94e742ebabe7;
Liver2FastqRd228BWCLID47147wgEncodeEM003054GSM10005717.0 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7366; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=cd25763737cae2ee36510e7149aed097;
Liver  Exons ENSEMBL V6528AWC,28BWCLID47146,LID47147wgEncodeEM003054GSM1000571 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7796; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=48a720d3b0430fb156e9283655c405ea;
Liver  ExonsDenovo28AWC,28BWCLID47146,LID47147wgEncodeEM003054GSM1000571 19 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7785; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=b4bf37191c11a1b66d379313ed926ace;
Liver  Contigs28AWC,28BWCLID47146,LID47147wgEncodeEM003054GSM10005719.7 MBbedRnaElements2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7344; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14halfContigs; md5sum=e63032bc23116aaa26bb58a115de8817;
Liver  Transcript ENSEMBL V6526BWC,26AWCLID47145,LID47144wgEncodeEM003053GSM10005742.9 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7806; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=dbec24f8a0744c7f8e1c5c5e2f8e5503;
Liver  Transcripts De novo26BWC,26AWCLID47145,LID47144wgEncodeEM003053GSM10005742.6 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7794; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=187341e291dc38cea9154daf77675b0a;
Liver  Junctions26AWC,26BWCLID47144,LID47145wgEncodeEM003053GSM1000574 13 MBbedRnaElements2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7383; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14Junctions; md5sum=ca57625fa380da681dcea8e0f0743c81;
Liver  Genes ENSEMBL V6526BWC,26AWCLID47145,LID47144wgEncodeEM003053GSM10005742.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7806; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=fa1cf5aec8ff9fd53c58c4ccab16be85;
Liver  Genes De Novo26BWC,26AWCLID47145,LID47144wgEncodeEM003053GSM10005742.1 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7794; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=feee858e3f5466f6540906f7ac936c1a;
Liver2FastqRd226BWCLID47145wgEncodeEM003053GSM1000574 17 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7371; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=761753ed2d5dd2da0c2d1d7933eedab8;
Liver  Exons ENSEMBL V6526BWC,26AWCLID47145,LID47144wgEncodeEM003053GSM1000574 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7806; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=b69ad03c734d4ea23441d7e70764841c;
Liver  ExonsDenovo26BWC,26AWCLID47145,LID47144wgEncodeEM003053GSM1000574 21 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7794; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=62fe859497aad6c881ef3ff00e6808f1;
Liver  Contigs26AWC,26BWCLID47144,LID47145wgEncodeEM003053GSM10005749.7 MBbedRnaElements2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7383; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14Contigs; md5sum=64b2e0730d062752446d2b15ef12bbf4;
Liver1Alignments26AWCLID47144wgEncodeEM003053   10 MBbam.bai2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7343; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14AlnRep1; md5sum=6ea390c9769e64e3ca249b64c911fe82;
Liver1Alignments26AWCLID47144wgEncodeEM003053   20 GBbam2012-07-112013-04-11strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7343; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14AlnRep1; md5sum=17e985f0f62f1027566f802d1124a987;
Liver2Alignments26BWCLID47145wgEncodeEM003053   12 MBbam.bai2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7371; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14AlnRep2; md5sum=ae9ccc87e63be92c4187ebb00b81d0ef;
Liver2Alignments26BWCLID47145wgEncodeEM003053   32 GBbam2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7371; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqLiverE14AlnRep2; md5sum=a3cadb7dee855f014ca6f4b8981b72c3;
Liver  Transcript ENSEMBL V6518AWC,18BWCLID21042,LID21043wgEncodeEM002515GSM9001954.6 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6341; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=c13b71d460c37cb46abd7d84b9018096;
Liver  Transcripts De novo18AWC,18BWCLID21042,LID21043wgEncodeEM002515GSM9001954.3 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5580; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=aac71e120277dadebb43d4729abcac5f;
Liver1FastqRd118AWCLID21042wgEncodeEM002515GSM9001955.0 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5430; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=a2fc7b86995cf9aeb831ad1f6aa2e17a;
Liver1FastqRd218AWCLID21042wgEncodeEM002515GSM9001955.2 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5430; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=6ef173f2416abf54fbed69a563f982b6;
Liver1Minus Raw signal18AWCLID21042wgEncodeEM002515GSM900195 68 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5430; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksMinusRawRep1; md5sum=c284895fc7b0841eea17dd280cd50750;
Liver1Plus Raw signal18AWCLID21042wgEncodeEM002515GSM900195 68 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5430; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksPlusRawRep1; md5sum=adfafa818af116dacf3cefefc1903dd7;
Liver1Spike-ins18AWCLID21042wgEncodeEM002515GSM900195115 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7751; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=b3a21cf478faee48ce97b859e7de0a28;
Liver2FastqRd118BWCLID21043wgEncodeEM002515GSM9001955.2 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5432; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=d4cb5f15c4761e976f3e8d249f42beb6;
Liver2FastqRd218BWCLID21043wgEncodeEM002515GSM9001955.3 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5432; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=04a6e21ba48c76bcc55879134649f2ca;
Liver2Minus Raw signal18BWCLID21043wgEncodeEM002515GSM900195 87 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5432; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksMinusRawRep2; md5sum=fd94929a7d7911fb5446931b5c02eb23;
Liver2Plus Raw signal18BWCLID21043wgEncodeEM002515GSM900195 88 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5432; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksPlusRawRep2; md5sum=b3cacc2b89a4b42cd043e91d08b18874;
Liver2Spike-ins18BWCLID21043wgEncodeEM002515GSM900195116 MBspikeins2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7770; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=63bd9b741228fca1908380695e1af8ed;
Liver  Junctions18AWC,18BWCLID21042,LID21043wgEncodeEM002515GSM9001955.0 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6226; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksJunctions; md5sum=be761ef890c2d8ac9716d203639667a1;
Liver  Genes ENSEMBL V6518AWC,18BWCLID21042,LID21043wgEncodeEM002515GSM9001953.0 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6341; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=d692cafb05cbdd05fdd10f7fbbd9220f;
Liver  Genes De Novo18AWC,18BWCLID21042,LID21043wgEncodeEM002515GSM9001951.1 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7088; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=be7fec77e0d0344a51369b8656e69501;
Liver  Exons ENSEMBL V6518AWC,18BWCLID21042,LID21043wgEncodeEM002515GSM900195 15 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6341; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=42c4609495a9ec04d8e022ffc22211f0;
Liver  ExonsDenovo18AWC,18BWCLID21042,LID21043wgEncodeEM002515GSM9001955.7 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7088; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=b31a319baf8845960ee11745b772cfcd;
Liver  Contigs18AWC,18BWCLID21042,LID21043wgEncodeEM002515GSM9001956.8 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5580; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksContigs; md5sum=cb1da6a2e0a77c24b32a86dd02f73c34;
Liver1Alignments18AWCLID21042wgEncodeEM002515  5.1 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7751; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep1V2; md5sum=f0e1a1227aeb57471b55bf0987299796;
Liver1Alignments18AWCLID21042wgEncodeEM002515  7.9 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7751; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep1V2; md5sum=5fdd53d6a9391823cf1c2f31a5d66ca2;
Liver2Alignments18BWCLID21043wgEncodeEM002515  5.4 MBbam.bai2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7770; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep2V2; md5sum=05a7e101579ccade6820dd2dbc87c33d;
Liver2Alignments18BWCLID21043wgEncodeEM002515  8.2 GBbam2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7770; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep2V2; md5sum=5a6fa139d8aa116c0b3c2528821bef85;
Lung  Transcript ENSEMBL V6515AWC,15BWCLID20920,LID20921wgEncodeEM002516GSM9001964.9 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6333; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=8cc495d0ec83f75bd7b617b4ad72a04b;
Lung  Transcripts De novo15AWC,15BWCLID20920,LID20921wgEncodeEM002516GSM9001966.0 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5572; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=4582c09679fdba9383fb1c4f2d36d4b4;
Lung1FastqRd115AWCLID20920wgEncodeEM002516GSM9001964.5 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5428; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=40d258d807a202ca5e86a2452c36c064;
Lung1FastqRd215AWCLID20920wgEncodeEM002516GSM9001964.7 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5428; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=0055f573f6748d26e356f40e14dea7ec;
Lung1Minus Raw signal15AWCLID20920wgEncodeEM002516GSM900196136 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5428; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksMinusRawRep1; md5sum=2f707336e42e4330bd6c7264cc63589e;
Lung1Plus Raw signal15AWCLID20920wgEncodeEM002516GSM900196138 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5428; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksPlusRawRep1; md5sum=82ea68db0be0f59ceb6d21e57647f618;
Lung1Spike-ins15AWCLID20920wgEncodeEM002516GSM900196 73 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7767; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=d323b1cdc7f7af24fb4f5ae3bffc755c;
Lung2FastqRd115BWCLID20921wgEncodeEM002516GSM9001963.9 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5429; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=8dff131251e633eaeedb689a71e7ac7d;
Lung2FastqRd215BWCLID20921wgEncodeEM002516GSM9001964.0 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5429; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=7d18cfd784b89751d24523ef3f3e7364;
Lung2Minus Raw signal15BWCLID20921wgEncodeEM002516GSM900196107 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5429; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksMinusRawRep2; md5sum=a3a04922bd41ad33ca2f240cdb459dea;
Lung2Plus Raw signal15BWCLID20921wgEncodeEM002516GSM900196109 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5429; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksPlusRawRep2; md5sum=834351b39d372254aa3ef414e1c805d7;
Lung2Spike-ins15BWCLID20921wgEncodeEM002516GSM900196 45 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7750; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=c499512904b81bd770f2cf4390a6aa8c;
Lung  Junctions15AWC,15BWCLID20920,LID20921wgEncodeEM002516GSM9001966.4 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6218; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksJunctions; md5sum=ee548ec66e1a4d8010470e651c1f1439;
Lung  Genes ENSEMBL V6515AWC,15BWCLID20920,LID20921wgEncodeEM002516GSM9001963.1 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6333; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=9d69563acce19780bd09fa5d1c986ad9;
Lung  Genes De Novo15AWC,15BWCLID20920,LID20921wgEncodeEM002516GSM9001961.7 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7080; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=894b190a92b947de51677629b8ac8eff;
Lung  Exons ENSEMBL V6515AWC,15BWCLID20920,LID20921wgEncodeEM002516GSM900196 16 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6333; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=33be360467d9b7f9bfcf1329adc9d753;
Lung  ExonsDenovo15AWC,15BWCLID20920,LID20921wgEncodeEM002516GSM9001967.6 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7080; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=86c6c48a5ac6c7d8160210cfeb63e8fc;
Lung  Contigs15AWC,15BWCLID20920,LID20921wgEncodeEM002516GSM900196 12 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5572; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksContigs; md5sum=42375f4b462455c08dcbd7f99a2281de;
Lung1Alignments15AWCLID20920wgEncodeEM002516  5.8 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7767; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksAlnRep1V2; md5sum=bc8e3e1c5d6c1891719acd9a2923d33c;
Lung1Alignments15AWCLID20920wgEncodeEM002516  7.0 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7767; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksAlnRep1V2; md5sum=7a6f7a1219ac3d34b7abf33bc05d993c;
Lung2Alignments15BWCLID20921wgEncodeEM002516  5.4 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7750; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksAlnRep2V2; md5sum=b436e61d83e1f30118a108a14c76da70;
Lung2Alignments15BWCLID20921wgEncodeEM002516  5.9 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7750; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksAlnRep2V2; md5sum=f023649a8704d067f12dd9ef21cb733c;
Mammary Gland  Transcript ENSEMBL V6522AWC,22BWCLID20924,LID20925wgEncodeEM002524GSM9001844.8 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6336; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=5e1393f1491a576846d9f28c0b327e3a;
Mammary Gland  Transcripts De novo22AWC,22BWCLID20924,LID20925wgEncodeEM002524GSM9001846.0 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5576; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=832f15b6cd720f9dceeafecb16d2c25b;
Mammary Gland1Minus Raw signal22AWCLID20924wgEncodeEM002524GSM900184130 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5484; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksMinusRawRep1; md5sum=ce7ca0045588cf75cd13af461ed8d8cb;
Mammary Gland1Plus Raw signal22AWCLID20924wgEncodeEM002524GSM900184133 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5484; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksPlusRawRep1; md5sum=aa162ebdcd7a14135323284c7dce6b7b;
Mammary Gland1Spike-ins22AWCLID20924wgEncodeEM002524GSM900184122 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7744; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=1784e699885e75b49f61246f5f34ec81;
Mammary Gland2Minus Raw signal22BWCLID20925wgEncodeEM002524GSM900184 92 MBbigWig2012-02-022012-11-02strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5496; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksMinusRawRep2; md5sum=88569548b4bf34aa31f915921ade9406;
Mammary Gland2Plus Raw signal22BWCLID20925wgEncodeEM002524GSM900184 94 MBbigWig2012-02-022012-11-02strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5496; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksPlusRawRep2; md5sum=2d078b58e0707686960488a876b033a7;
Mammary Gland2Spike-ins22BWCLID20925wgEncodeEM002524GSM900184 38 MBspikeins2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7772; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=c710f040e65014649b35986501a9e06b;
Mammary Gland  Junctions22AWC,22BWCLID20924,LID20925wgEncodeEM002524GSM9001846.6 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6221; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksJunctions; md5sum=fa51e207a62865246d9e76e712cc053e;
Mammary Gland  Genes ENSEMBL V6522AWC,22BWCLID20924,LID20925wgEncodeEM002524GSM9001843.1 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6336; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=e967cadfb3e1f0627adc9b34997af284;
Mammary Gland  Genes De Novo22AWC,22BWCLID20924,LID20925wgEncodeEM002524GSM9001841.8 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7083; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=ffe0361386079621697475e8904e9ed3;
Mammary Gland1Alignments22AWCLID20924wgEncodeEM002524  6.4 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7744; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep1V2; md5sum=45a095c59036c9e523fd65c30ffe49ef;
Mammary Gland1Alignments22AWCLID20924wgEncodeEM002524  10.0 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7744; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep1V2; md5sum=da93b8dba68d989dd991a5d0c3047481;
Mammary Gland1FastqRd122AWCLID20924wgEncodeEM002524GSM9001846.1 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5484; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=c7618dc7222f1750713800e03efbb890;
Mammary Gland1FastqRd222AWCLID20924wgEncodeEM002524GSM9001846.2 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5484; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=345aaf9e5ccdcded021657bff7fdcbe8;
Mammary Gland2Alignments22BWCLID20925wgEncodeEM002524  5.1 MBbam.bai2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7772; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep2V2; md5sum=4ce01fa5356d444e7ad529c48205829e;
Mammary Gland2Alignments22BWCLID20925wgEncodeEM002524  5.7 GBbam2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7772; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep2V2; md5sum=7ade5dd321734a75bcf684a1496c6382;
Mammary Gland2FastqRd122BWCLID20925wgEncodeEM002524GSM9001843.8 GBfastq.tgz2012-02-022012-11-02strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5496; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=ca187e047d301fab6132c525bd0018e4;
Mammary Gland2FastqRd222BWCLID20925wgEncodeEM002524GSM9001844.0 GBfastq.tgz2012-02-022012-11-02strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5496; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=0eb392b5932743c2c933a2cf486d91cf;
Mammary Gland  Exons ENSEMBL V6522AWC,22BWCLID20924,LID20925wgEncodeEM002524GSM900184 16 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6336; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=fca2319524aed25d3a34e6c9addaf3cf;
Mammary Gland  ExonsDenovo22AWC,22BWCLID20924,LID20925wgEncodeEM002524GSM9001847.4 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7083; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=846045da93d6a981757bafd87c4b9694;
Mammary Gland  Contigs22AWC,22BWCLID20924,LID20925wgEncodeEM002524GSM900184 11 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5576; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksContigs; md5sum=086b4e579b642a0ea6b629dcb0d0f7e7;
Ovary  Transcript ENSEMBL V6511AWC,11BWCLID20821,LID20822wgEncodeEM002525GSM9001834.9 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6346; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=f1695a7156e5f69e9f4491b08b4805f2;
Ovary  Transcripts De novo11AWC,11BWCLID20821,LID20822wgEncodeEM002525GSM9001836.1 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5584; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=cc14c2dfa07f50e45c5fa8b79374ab3f;
Ovary1Minus Raw signal11AWCLID20821wgEncodeEM002525GSM900183104 MBbigWig2012-02-022012-11-02strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5495; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksMinusRawRep1; md5sum=a05f48c82d9d4c70863534f731f44e3f;
Ovary1Plus Raw signal11AWCLID20821wgEncodeEM002525GSM900183105 MBbigWig2012-02-022012-11-02strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5495; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksPlusRawRep1; md5sum=493d9e1a1f38212935ae417a67a54cb7;
Ovary1Spike-ins11AWCLID20821wgEncodeEM002525GSM900183 30 MBspikeins2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7771; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=4780d50f933cef68f2ecad829d78ca70;
Ovary2Minus Raw signal11BWCLID20822wgEncodeEM002525GSM900183 97 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5483; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksMinusRawRep2; md5sum=86943199416f48257ecfa02758687334;
Ovary2Plus Raw signal11BWCLID20822wgEncodeEM002525GSM900183 98 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5483; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksPlusRawRep2; md5sum=f3a19a69f7c32232ba9add1c3f53e998;
Ovary2Spike-ins11BWCLID20822wgEncodeEM002525GSM900183 35 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7743; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=c1b53b0b2b474b884aca22f5c150ffa9;
Ovary  Junctions11AWC,11BWCLID20821,LID20822wgEncodeEM002525GSM9001836.1 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6230; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksJunctions; md5sum=f85098890bea24255bc8f3bc8188ae7b;
Ovary  Genes ENSEMBL V6511AWC,11BWCLID20821,LID20822wgEncodeEM002525GSM9001833.1 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6346; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=4422bce2e04a0ac9428c47ca8f2d6f40;
Ovary  Genes De Novo11AWC,11BWCLID20821,LID20822wgEncodeEM002525GSM9001831.9 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7093; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=e0c4bc68571bba0e9e8f7233e33d6370;
Ovary1Alignments11AWCLID20821wgEncodeEM002525  5.5 MBbam.bai2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7771; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep1V2; md5sum=2cd65ca4622d56a8c57b58b69f96592d;
Ovary1Alignments11AWCLID20821wgEncodeEM002525  5.4 GBbam2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7771; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep1V2; md5sum=014514a7b0922b3958c22362168c0ebc;
Ovary1FastqRd111AWCLID20821wgEncodeEM002525GSM9001833.3 GBfastq.tgz2012-02-022012-11-02strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5495; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=143b642bc67085e089034c92fb1cbeba;
Ovary1FastqRd211AWCLID20821wgEncodeEM002525GSM9001833.4 GBfastq.tgz2012-02-022012-11-02strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5495; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=5467c457176218b0809198060665aac3;
Ovary2Alignments11BWCLID20822wgEncodeEM002525  5.0 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7743; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep2V2; md5sum=6f7bef4013dc6fff58e9eb385626d04c;
Ovary2FastqRd111BWCLID20822wgEncodeEM002525GSM9001833.1 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5483; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=e4c98bd0554f6a7ace04c93cbe22f1b9;
Ovary2FastqRd211BWCLID20822wgEncodeEM002525GSM9001833.2 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5483; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=e3e69249e5583b71bf73ac49b24056f9;
Ovary  Exons ENSEMBL V6511AWC,11BWCLID20821,LID20822wgEncodeEM002525GSM900183 16 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6346; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=0086ec1243662d3bd4ca82921edd507d;
Ovary  ExonsDenovo11AWC,11BWCLID20821,LID20822wgEncodeEM002525GSM9001837.3 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7093; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=ffe4cab8766f6d37ac92e3f5a763ae6c;
Ovary  Contigs11AWC,11BWCLID20821,LID20822wgEncodeEM002525GSM900183 11 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5584; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksContigs; md5sum=536c6627aeb9f8fe77e39e95eb5e181f;
Ovary2Alignments11BWCLID20822wgEncodeEM002525  5.5 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7743; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep2V2; md5sum=3aba550a7b1642acfb4b952d3f43e7a9;
Placenta  Transcript ENSEMBL V6510BWC,10AWCLID46984,LID46983wgEncodeEM003061GSM10005653.0 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7804; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=c290938ebe5dfda3b8a0865704018608;
Placenta  Transcripts De novo10BWC,10AWCLID46984,LID46983wgEncodeEM003061GSM10005654.2 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7791; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=4494015c9fae4d80222b48982092d2b5;
Placenta1Alignments10AWCLID46983wgEncodeEM003061   30 GBbam2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7365; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep1; md5sum=d643b27b044340d8cb18c301bdeda80e;
Placenta1FastqRd110AWCLID46983wgEncodeEM003061GSM1000565 18 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7365; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=86d2863ee8f48452d4176f0706fcacb2;
Placenta1FastqRd210AWCLID46983wgEncodeEM003061GSM1000565 19 GBfastq2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7365; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=0fbc2c7550c198ff0bd1dbb825819753;
Placenta1Minus Raw signal10AWCLID46983wgEncodeEM003061GSM1000565264 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7365; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksMinusRawRep1; md5sum=4d19bbae6a057acc75b846cf900e93e8;
Placenta1Plus Raw signal10AWCLID46983wgEncodeEM003061GSM1000565267 MBbigWig2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7365; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksPlusRawRep1; md5sum=a700f9186c08eab1799248eec8882925;
Placenta1Spike-ins10AWCLID46983wgEncodeEM003061GSM10005651006 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7826; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=c5ef9c245fb0e46dc4504c11b8e531e9;
Placenta2FastqRd110BWCLID46984wgEncodeEM003061GSM1000565 19 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7389; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=e961fa35b633bed371949ed8074b8f2b;
Placenta2FastqRd210BWCLID46984wgEncodeEM003061GSM1000565 19 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7389; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=9fdf649e2599cd9c2e71d4edbd3ca7cd;
Placenta2Minus Raw signal10BWCLID46984wgEncodeEM003061GSM1000565285 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7389; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksMinusRawRep2; md5sum=6434c862b9d55f65f657f50a8d1a2c30;
Placenta2Plus Raw signal10BWCLID46984wgEncodeEM003061GSM1000565288 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7389; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksPlusRawRep2; md5sum=f7cb4053650762610fd5da777e0b5e69;
Placenta2Spike-ins10BWCLID46984wgEncodeEM003061GSM1000565850 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7829; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=59a42389bf55931ca643a9973d9320f8;
Placenta  Junctions10AWC,10BWCLID46983,LID46984wgEncodeEM003061GSM1000565 18 MBbedRnaElements2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7370; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksJunctions; md5sum=bfffdd18df744d6204a3447fdb4a1e25;
Placenta  Genes ENSEMBL V6510BWC,10AWCLID46984,LID46983wgEncodeEM003061GSM10005652.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7804; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=68620e08e08bb280429fa3b5748ca974;
Placenta  Genes De Novo10BWC,10AWCLID46984,LID46983wgEncodeEM003061GSM10005653.6 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7791; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=07255045e0d172edbbd8d0e8375a9337;
Placenta  Exons ENSEMBL V6510BWC,10AWCLID46984,LID46983wgEncodeEM003061GSM1000565 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7804; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=07eca70f8dcf4f7e21d7878199bfe73a;
Placenta  ExonsDenovo10BWC,10AWCLID46984,LID46983wgEncodeEM003061GSM1000565 27 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7791; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=04afe780b14494c14009cbd7bfbf3b6f;
Placenta  Contigs10AWC,10BWCLID46983,LID46984wgEncodeEM003061GSM1000565 12 MBbedRnaElements2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7370; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksContigs; md5sum=0e58771bb1a14c5e29168e9807e0aa22;
Placenta1Alignments10AWCLID46983wgEncodeEM003061  9.2 MBbam.bai2012-07-132013-04-13strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7365; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep1; md5sum=94985d392151b69ac250c3602f2a4fca;
Placenta2Alignments10BWCLID46984wgEncodeEM003061  9.5 MBbam.bai2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7389; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep2; md5sum=ea4867c1146345a5f1917bc1d0748c41;
Placenta2Alignments10BWCLID46984wgEncodeEM003061   31 GBbam2012-07-142013-04-14strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7389; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep2; md5sum=4c50c3347bd3cc6c6c0932b1d0a6e8c7;
Small Intestine  Transcript ENSEMBL V659AWC,9BWCLID20819,LID20820wgEncodeEM002526GSM9001864.6 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6335; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=b78f223204fe66c624f1ae7012d26414;
Small Intestine  Transcripts De novo9AWC,9BWCLID20819,LID20820wgEncodeEM002526GSM9001864.7 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5574; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=a513f9843370fcaa775f9facad007b9d;
Small Intestine1Alignments9AWCLID20819wgEncodeEM002526  5.3 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7759; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep1V2; md5sum=5eb487e5229677f302a0fb172ef633a7;
Small Intestine1Alignments9AWCLID20819wgEncodeEM002526  6.7 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7759; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep1V2; md5sum=84deb2cd9e1d9560f86dddd19c27145d;
Small Intestine1FastqRd19AWCLID20819wgEncodeEM002526GSM9001864.1 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5499; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=2aeeeb17acaed6c576fbeb152ab2bb91;
Small Intestine1Minus Raw signal9AWCLID20819wgEncodeEM002526GSM900186 63 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5499; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksMinusRawRep1; md5sum=dfe1fb36b5b18795530e2b529a1ab162;
Small Intestine1Plus Raw signal9AWCLID20819wgEncodeEM002526GSM900186 64 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5499; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksPlusRawRep1; md5sum=8fc472a270bc5f4cf51f0d4e71d2f3ce;
Small Intestine1Spike-ins9AWCLID20819wgEncodeEM002526GSM900186 46 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7759; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=123f24735bf88e9776556de50dcbfb29;
Small Intestine2Alignments9BWCLID20820wgEncodeEM002526  5.5 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7745; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep2V2; md5sum=39c213dcc816b55c5df32dcec30c959f;
Small Intestine2Alignments9BWCLID20820wgEncodeEM002526  6.5 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7745; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep2V2; md5sum=2a4fb32f5a1284a0b9af34168486d6b9;
Small Intestine2FastqRd19BWCLID20820wgEncodeEM002526GSM9001864.1 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5486; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=2fd83d2ac4c0a7db8e570111a9f2ade3;
Small Intestine2Minus Raw signal9BWCLID20820wgEncodeEM002526GSM900186 86 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5486; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksMinusRawRep2; md5sum=397ec598661ccaa2f2c3eda82a5ed96f;
Small Intestine2Plus Raw signal9BWCLID20820wgEncodeEM002526GSM900186 86 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5486; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksPlusRawRep2; md5sum=b9edd94db03d72d74b8b0094e9fc62b7;
Small Intestine2Spike-ins9BWCLID20820wgEncodeEM002526GSM900186 45 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7745; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=4fa13866ea6f214969ffcd4071622974;
Small Intestine  Junctions9AWC,9BWCLID20819,LID20820wgEncodeEM002526GSM9001865.4 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6219; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksJunctions; md5sum=005af6f70bc78d5f60cc42c668a5e481;
Small Intestine  Genes ENSEMBL V659AWC,9BWCLID20819,LID20820wgEncodeEM002526GSM9001863.0 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6335; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=aa08b6c995bed0a4bca1beea510ec774;
Small Intestine  Genes De Novo9AWC,9BWCLID20819,LID20820wgEncodeEM002526GSM9001861.5 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7082; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=1506ae3284efd477a228ecf4a332e0a5;
Small Intestine1FastqRd29AWCLID20819wgEncodeEM002526GSM9001864.4 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5499; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=1fa12baf9dae6b28b1b27eb7bb661167;
Small Intestine2FastqRd29BWCLID20820wgEncodeEM002526GSM9001864.3 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5486; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=05ef9479e1469f16cdfdca195a97d3d5;
Small Intestine  Exons ENSEMBL V659AWC,9BWCLID20819,LID20820wgEncodeEM002526GSM900186 15 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6335; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=1ce2b5d54787991e22e53648182ffc22;
Small Intestine  ExonsDenovo9AWC,9BWCLID20819,LID20820wgEncodeEM002526GSM9001865.7 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7082; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=ed7feab073dad95eade12f061dcfd7c6;
Small Intestine  Contigs9AWC,9BWCLID20819,LID20820wgEncodeEM002526GSM9001868.4 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5574; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksContigs; md5sum=ae10c6ea450b63e9b003e9392535265a;
Spleen  Transcript ENSEMBL V6513AWC,13BWCLID21038,LID21039wgEncodeEM002517GSM9001974.8 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6337; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=5ee3dc6a80508712fd87a4d79bb13981;
Spleen  Transcripts De novo13AWC,13BWCLID21038,LID21039wgEncodeEM002517GSM9001976.1 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5575; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=c9f8fb0affc8b05836b0a6dc43acdf5b;
Spleen1Alignments13AWCLID21038wgEncodeEM002517  5.7 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7758; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep1V2; md5sum=109ee54b690e5c8b33df33039272f1b4;
Spleen1Alignments13AWCLID21038wgEncodeEM002517  7.4 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7758; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep1V2; md5sum=0d154d9e52d230113b5779a87ff07d4f;
Spleen1FastqRd113AWCLID21038wgEncodeEM002517GSM9001974.5 GBfastq.tgz2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5438; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=e6b19727364985bb9f64a9c4ad62f5cb;
Spleen1FastqRd213AWCLID21038wgEncodeEM002517GSM9001974.6 GBfastq.tgz2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5438; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=63ada593efcfba4e1dde0b6a30e3aee3;
Spleen1Minus Raw signal13AWCLID21038wgEncodeEM002517GSM900197104 MBbigWig2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5438; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksMinusRawRep1; md5sum=8142ad4f7a2070e5940c34e454a10fe9;
Spleen1Plus Raw signal13AWCLID21038wgEncodeEM002517GSM900197105 MBbigWig2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5438; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksPlusRawRep1; md5sum=4115f23106bb6a8f487cf1bd28b5b3c3;
Spleen1Spike-ins13AWCLID21038wgEncodeEM002517GSM900197 33 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7758; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=3044f8692be0847a72b122768c40ba00;
Spleen2Alignments13BWCLID21039wgEncodeEM002517  8.0 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7741; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep2V2; md5sum=03457ae36551ea6c4235671737eef95f;
Spleen2FastqRd113BWCLID21039wgEncodeEM002517GSM9001974.7 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5425; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=69561ce8ce808cbd1f829c3205f35d2c;
Spleen2Minus Raw signal13BWCLID21039wgEncodeEM002517GSM900197118 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5425; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksMinusRawRep2; md5sum=f68826ca23a4f1f562ae6d4757f2bfa8;
Spleen2Plus Raw signal13BWCLID21039wgEncodeEM002517GSM900197120 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5425; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksPlusRawRep2; md5sum=671b17da838d02f4f3912ae9f3cbcc93;
Spleen  Junctions13AWC,13BWCLID21038,LID21039wgEncodeEM002517GSM9001976.0 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6222; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksJunctions; md5sum=b042e285508a89d4410f7963b91bb995;
Spleen  Genes ENSEMBL V6513AWC,13BWCLID21038,LID21039wgEncodeEM002517GSM9001973.1 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6337; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=4b0daeeda283c40d873af7c685078aae;
Spleen2FastqRd213BWCLID21039wgEncodeEM002517GSM9001974.9 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5425; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=f82961f80c53e45562b27b7164f05489;
Spleen  Exons ENSEMBL V6513AWC,13BWCLID21038,LID21039wgEncodeEM002517GSM900197 15 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6337; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=b6c2008999b24a777eb057917ca7fe4b;
Spleen  Contigs13AWC,13BWCLID21038,LID21039wgEncodeEM002517GSM900197 11 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5575; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksContigs; md5sum=039d5d96313c1e1e900e40edf18d48a3;
Spleen2Spike-ins13BWCLID21039wgEncodeEM002517GSM900197 61 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7741; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=7838e5c486364fd4a208d9fb30074ebb;
Spleen  Genes De Novo13AWC,13BWCLID21038,LID21039wgEncodeEM002517GSM9001971.9 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7084; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=bbcf78802eb4c5e298f99df6fafdc991;
Spleen  ExonsDenovo13AWC,13BWCLID21038,LID21039wgEncodeEM002517GSM9001977.1 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7084; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=e2c32140921922edab8676e2c9417b08;
Spleen2Alignments13BWCLID21039wgEncodeEM002517  6.0 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7741; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep2V2; md5sum=fcd469e08671a9b64d2e250ee109ef67;
Stomach  Transcript ENSEMBL V653AWC,3BWCLID20732,LID20733wgEncodeEM002527GSM9001854.5 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6342; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=2916c91aaebf73d80c6a0f75783f4a8c;
Stomach  Transcripts De novo3AWC,3BWCLID20732,LID20733wgEncodeEM002527GSM9001854.2 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5581; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=a2b97627283ff604ebfda007bea73739;
Stomach1Minus Raw signal3AWCLID20732wgEncodeEM002527GSM900185 46 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5497; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksMinusRawRep1; md5sum=0126df3283b34395af24a0e3801c49e9;
Stomach1Plus Raw signal3AWCLID20732wgEncodeEM002527GSM900185 47 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5497; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksPlusRawRep1; md5sum=a4148a8080a2553c1f7e54809e4278fd;
Stomach1Spike-ins3AWCLID20732wgEncodeEM002527GSM900185 73 MBspikeins2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7773; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=fa478ade934a06ee10ba8718e5444df8;
Stomach2Minus Raw signal3BWCLID20733wgEncodeEM002527GSM900185 61 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5489; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksMinusRawRep2; md5sum=9a1505b724d30b52778603bcbd0e3a43;
Stomach2Plus Raw signal3BWCLID20733wgEncodeEM002527GSM900185 62 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5489; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksPlusRawRep2; md5sum=ac0c03936c784fdc3724812f6dfc9205;
Stomach2Spike-ins3BWCLID20733wgEncodeEM002527GSM900185 88 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7748; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=d0932c5216d5c681d05624326878dc6a;
Stomach  Junctions3AWC,3BWCLID20732,LID20733wgEncodeEM002527GSM9001854.8 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6227; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksJunctions; md5sum=ebde5303e69b04ed0bb8674c4efff614;
Stomach  Genes ENSEMBL V653AWC,3BWCLID20732,LID20733wgEncodeEM002527GSM9001852.9 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6342; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=3f72793677e68b10215f56cb24351a63;
Stomach  Genes De Novo3AWC,3BWCLID20732,LID20733wgEncodeEM002527GSM9001851.3 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7089; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=20ead0412e92554a0248eb8f98d55eb0;
Stomach1FastqRd13AWCLID20732wgEncodeEM002527GSM9001854.5 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5497; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=447e6300e3d2fb14a3fe285140d9846d;
Stomach1FastqRd23AWCLID20732wgEncodeEM002527GSM9001854.8 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5497; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=7232071ddce4d8b1b8987cf290b632b6;
Stomach2FastqRd13BWCLID20733wgEncodeEM002527GSM9001855.2 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5489; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=11c4286d5fe1197f250815060cf14402;
Stomach2FastqRd23BWCLID20733wgEncodeEM002527GSM9001855.5 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5489; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=98aa5c5dc024ae23a394820dfe5b5ebc;
Stomach  Exons ENSEMBL V653AWC,3BWCLID20732,LID20733wgEncodeEM002527GSM900185 15 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6342; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=3ed29463e63cca0baec4c726081bd8e0;
Stomach  ExonsDenovo3AWC,3BWCLID20732,LID20733wgEncodeEM002527GSM9001855.1 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7089; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=705e1b8168dc42cae9b11b13bc34af0a;
Stomach  Contigs3AWC,3BWCLID20732,LID20733wgEncodeEM002527GSM9001855.6 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5581; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksContigs; md5sum=99abc6db2845dfb5a9bcb2ea127c2f26;
Stomach1Alignments3AWCLID20732wgEncodeEM002527  4.8 MBbam.bai2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7773; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep1V2; md5sum=6376e701670cf5e35d6b95b59d22bc3b;
Stomach1Alignments3AWCLID20732wgEncodeEM002527  6.7 GBbam2012-07-302013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7773; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep1V2; md5sum=a5048747ee3608bb9091a672eaa64783;
Stomach2Alignments3BWCLID20733wgEncodeEM002527  5.5 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7748; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep2V2; md5sum=de82b75478f385228ffadf2e991cffa0;
Stomach2Alignments3BWCLID20733wgEncodeEM002527  7.9 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7748; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep2V2; md5sum=27af8306dede10acc647ada1cacaa09b;
Subcutaneous Fat Pad  Transcript ENSEMBL V655AWC,5BWCLID21181,LID21182wgEncodeEM002528GSM9001914.9 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6339; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=191376843f11f0853fa9b2b3cd5dd3de;
Subcutaneous Fat Pad  Transcripts De novo5AWC,5BWCLID21181,LID21182wgEncodeEM002528GSM9001915.6 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5578; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=cf9f8fc5d610b28af6b6acd6877fcf69;
Subcutaneous Fat Pad1FastqRd15AWCLID21181wgEncodeEM002528GSM9001915.2 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5487; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=4f5d28630a26eda95744fc80bd6d4e6f;
Subcutaneous Fat Pad1FastqRd25AWCLID21181wgEncodeEM002528GSM9001915.5 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5487; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=db81d46dceb87b2a02f298fad37062e5;
Subcutaneous Fat Pad1Minus Raw signal5AWCLID21181wgEncodeEM002528GSM900191137 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5487; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksMinusRawRep1; md5sum=24fc3b46b1e954a6f507faa15a84fc21;
Subcutaneous Fat Pad1Plus Raw signal5AWCLID21181wgEncodeEM002528GSM900191139 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5487; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksPlusRawRep1; md5sum=67dd18e2e2170c923ef6b06ef3fc50a2;
Subcutaneous Fat Pad1Spike-ins5AWCLID21181wgEncodeEM002528GSM900191137 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7763; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=1fd45389017603616bd8333826e79c23;
Subcutaneous Fat Pad2FastqRd15BWCLID21182wgEncodeEM002528GSM9001915.2 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5492; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=11f8c5d69fe90223ba65876ef0c04f8e;
Subcutaneous Fat Pad2Minus Raw signal5BWCLID21182wgEncodeEM002528GSM900191114 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5492; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksMinusRawRep2; md5sum=9ed630b679008b5418388e2cc99e9f96;
Subcutaneous Fat Pad2Plus Raw signal5BWCLID21182wgEncodeEM002528GSM900191117 MBbigWig2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5492; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksPlusRawRep2; md5sum=9151ce8f2cd0bbc3a70c8ed5f29dab7a;
Subcutaneous Fat Pad2Spike-ins5BWCLID21182wgEncodeEM002528GSM900191142 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7753; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=dcae21fa5b55c111346d23dff0e94896;
Subcutaneous Fat Pad  Junctions5AWC,5BWCLID21181,LID21182wgEncodeEM002528GSM9001916.8 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6224; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksJunctions; md5sum=3d581e60fe8d2496e41a5b346aa1f384;
Subcutaneous Fat Pad  Genes ENSEMBL V655AWC,5BWCLID21181,LID21182wgEncodeEM002528GSM9001913.1 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6339; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=3e83ba1e6b0cd9286f13a867da15b5da;
Subcutaneous Fat Pad  Genes De Novo5AWC,5BWCLID21181,LID21182wgEncodeEM002528GSM9001911.5 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7085; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=b0b1a539240fb4b45e78d11b27dedff0;
Subcutaneous Fat Pad2FastqRd25BWCLID21182wgEncodeEM002528GSM9001915.5 GBfastq.tgz2012-02-012012-11-01strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5492; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=81b314baf70cc675f9a1400be4dff678;
Subcutaneous Fat Pad  Exons ENSEMBL V655AWC,5BWCLID21181,LID21182wgEncodeEM002528GSM900191 16 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6339; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=c5150ab11cc8103480bb0e50ce337cfd;
Subcutaneous Fat Pad  ExonsDenovo5AWC,5BWCLID21181,LID21182wgEncodeEM002528GSM9001917.3 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7085; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=6fc5b76776c35dd7a58d0458d334d53a;
Subcutaneous Fat Pad  Contigs5AWC,5BWCLID21181,LID21182wgEncodeEM002528GSM900191 12 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5578; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksContigs; md5sum=05ffb901871eee2052123f911251b46c;
Subcutaneous Fat Pad1Alignments5AWCLID21181wgEncodeEM002528  6.0 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7763; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep1V2; md5sum=38b726c927cd80a9db6c6f5fb8629a42;
Subcutaneous Fat Pad1Alignments5AWCLID21181wgEncodeEM002528  8.8 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7763; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep1V2; md5sum=6aa3ac26e74b7b96176788b7dc625019;
Subcutaneous Fat Pad2Alignments5BWCLID21182wgEncodeEM002528  5.7 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7753; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep2V2; md5sum=7b2050ef9ab8141da76a1b237480c3fc;
Subcutaneous Fat Pad2Alignments5BWCLID21182wgEncodeEM002528  8.8 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7753; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep2V2; md5sum=ee30ac61ae0e4c012455c970aab0968c;
Testis  Transcript ENSEMBL V6512AWC,12BWCLID20868,LID20869wgEncodeEM002519GSM9001935.2 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6340; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=e250a3010d4d9441863d1d016d224fe3;
Testis  Transcripts De novo12AWC,12BWCLID20868,LID20869wgEncodeEM002519GSM9001937.0 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5579; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=81795845bc2acf9eab930bac03d4e6d6;
Testis1FastqRd112AWCLID20868wgEncodeEM002519GSM9001934.7 GBfastq.tgz2012-01-062012-10-05strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5440; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=b75d6b042ea4c80ad16fa22af3406769;
Testis1FastqRd212AWCLID20868wgEncodeEM002519GSM9001934.9 GBfastq.tgz2012-01-062012-10-05strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5440; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=371f1c8c9b0485e1908ea9a4eef2cfd9;
Testis1Minus Raw signal12AWCLID20868wgEncodeEM002519GSM900193146 MBbigWig2012-01-062012-10-05strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5440; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksMinusRawRep1; md5sum=6494896b6f9e3aef359082a2e1f8396d;
Testis1Plus Raw signal12AWCLID20868wgEncodeEM002519GSM900193150 MBbigWig2012-01-062012-10-05strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5440; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksPlusRawRep1; md5sum=21026339eb5c691c1ce1913474219c87;
Testis1Spike-ins12AWCLID20868wgEncodeEM002519GSM900193136 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7749; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=0ba53663e545bd6b5b1468c5e505fed6;
Testis2Minus Raw signal12BWCLID20869wgEncodeEM002519GSM900193150 MBbigWig2012-01-102012-10-10strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5448; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksMinusRawRep2; md5sum=e6bbcd2d1274174f0271d7f1338f883a;
Testis2Plus Raw signal12BWCLID20869wgEncodeEM002519GSM900193154 MBbigWig2012-01-102012-10-10strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5448; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksPlusRawRep2; md5sum=d9a78e0013b70c36cbe2993fdc435027;
Testis2Spike-ins12BWCLID20869wgEncodeEM002519GSM900193144 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7747; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=b04ecfbe858d2252307cf28831508ab3;
Testis  Junctions12AWC,12BWCLID20868,LID20869wgEncodeEM002519GSM9001939.0 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6225; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksJunctions; md5sum=0daee33738dc18e3abfeaf746b486346;
Testis  Genes ENSEMBL V6512AWC,12BWCLID20868,LID20869wgEncodeEM002519GSM9001933.4 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6340; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=f316652bd834ca20968c51d09e422737;
Testis  Genes De Novo12AWC,12BWCLID20868,LID20869wgEncodeEM002519GSM9001932.0 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7087; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=44fe058fc788510294d8bdbb334e6f08;
Testis2FastqRd112BWCLID20869wgEncodeEM002519GSM9001935.1 GBfastq.tgz2012-01-102012-10-10strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5448; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=7a06de5b26eeda46a7dc59683a5468b4;
Testis2FastqRd212BWCLID20869wgEncodeEM002519GSM9001935.3 GBfastq.tgz2012-01-102012-10-10strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5448; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=46799d7d70b456bda895c5ee20145b12;
Testis  Exons ENSEMBL V6512AWC,12BWCLID20868,LID20869wgEncodeEM002519GSM900193 16 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6340; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=408313aa1c409e95bd03554645e1e75f;
Testis  ExonsDenovo12AWC,12BWCLID20868,LID20869wgEncodeEM002519GSM9001938.3 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7087; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=138b938c443f040eae10127fa772629e;
Testis  Contigs12AWC,12BWCLID20868,LID20869wgEncodeEM002519GSM900193 16 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5579; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksContigs; md5sum=a55e0be980231f22eb2efdc014ecb1b9;
Testis1Alignments12AWCLID20868wgEncodeEM002519  6.2 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7749; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksAlnRep1V2; md5sum=da9e0df1d1a1ab79f66a32479b848613;
Testis1Alignments12AWCLID20868wgEncodeEM002519  7.3 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7749; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksAlnRep1V2; md5sum=99b1e95320edf866ee3d9cd7635d01b4;
Testis2Alignments12BWCLID20869wgEncodeEM002519  6.3 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7747; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksAlnRep2V2; md5sum=cbb1d5c1fc4a99fc7bb61ca48d5268db;
Testis2Alignments12BWCLID20869wgEncodeEM002519  8.1 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=M; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7747; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksAlnRep2V2; md5sum=d20cfa2862224713f2770262946d0eaf;
Thymus  Transcript ENSEMBL V6519AWC,19BWCLID20922,LID20923wgEncodeEM002518GSM9001924.9 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6343; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=4dcd9a3fbcc8c064fe060f5ec36f9bff;
Thymus  Transcripts De novo19AWC,19BWCLID20922,LID20923wgEncodeEM002518GSM9001926.6 MBgtf2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5582; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=88f255fc777f0d80f79bc6a3b2efb499;
Thymus1Alignments19AWCLID20922wgEncodeEM002518  5.9 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7754; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep1V2; md5sum=0950d624b85a00f6330e6e249962ce58;
Thymus1Alignments19AWCLID20922wgEncodeEM002518  7.9 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7754; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep1V2; md5sum=0b65f0b9dc3c4bca808001a8f5283cde;
Thymus1Minus Raw signal19AWCLID20922wgEncodeEM002518GSM900192131 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5433; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksMinusRawRep1; md5sum=754291103431ef530b9b1615cf54ec05;
Thymus1Plus Raw signal19AWCLID20922wgEncodeEM002518GSM900192134 MBbigWig2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5433; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksPlusRawRep1; md5sum=27702003bbc52e7b9bb284834ee27d72;
Thymus1Spike-ins19AWCLID20922wgEncodeEM002518GSM900192 76 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7754; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=3cae1fbb46211ed857bb5ca8de07c681;
Thymus2Alignments19BWCLID20923wgEncodeEM002518   10 GBbam2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7746; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep2V2; md5sum=eb4d3e85007fac7d2376eb01d46c8c58;
Thymus2Minus Raw signal19BWCLID20923wgEncodeEM002518GSM900192162 MBbigWig2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5437; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksMinusRawRep2; md5sum=1e366a791c132d42d620664dbc18b6b8;
Thymus2Plus Raw signal19BWCLID20923wgEncodeEM002518GSM900192166 MBbigWig2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5437; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksPlusRawRep2; md5sum=b45f8cdff7fb104b352b78a25f5b728b;
Thymus2Spike-ins19BWCLID20923wgEncodeEM002518GSM900192 97 MBspikeins2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7746; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=6321cc5530984f67c0b3c1a531acb0ed;
Thymus  Junctions19AWC,19BWCLID20922,LID20923wgEncodeEM002518GSM9001927.4 MBbedRnaElements2012-03-232012-12-23strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6228; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksJunctions; md5sum=f843a61469fd551dfce9a58dcb834c09;
Thymus  Genes ENSEMBL V6519AWC,19BWCLID20922,LID20923wgEncodeEM002518GSM9001923.2 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6343; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=1dc53ffa1dcb390c2dba32aaa8b200e3;
Thymus  Genes De Novo19AWC,19BWCLID20922,LID20923wgEncodeEM002518GSM9001922.1 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7090; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=56855351ee6ba54f96b9673a9cfddd70;
Thymus1FastqRd119AWCLID20922wgEncodeEM002518GSM9001925.1 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5433; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=fa346481f43482e7339b5a8706ab7de0;
Thymus1FastqRd219AWCLID20922wgEncodeEM002518GSM9001925.2 GBfastq.tgz2012-01-052012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5433; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=60cd53ec6332fd0a16cbc268067f593e;
Thymus2FastqRd119BWCLID20923wgEncodeEM002518GSM9001926.5 GBfastq.tgz2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5437; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=4707017880c0cd07de604c57b4e56693;
Thymus2FastqRd219BWCLID20923wgEncodeEM002518GSM9001926.8 GBfastq.tgz2012-01-062012-10-05strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5437; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; md5sum=a6c1cb32e535bef8f4e863f39f3d78f6;
Thymus  Exons ENSEMBL V6519AWC,19BWCLID20922,LID20923wgEncodeEM002518GSM900192 16 MBgtf2012-03-262012-12-26strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=6343; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=b1bca43997c49b1716862e9c3a24011b;
Thymus  ExonsDenovo19AWC,19BWCLID20922,LID20923wgEncodeEM002518GSM9001927.5 MBgtf2012-06-192013-03-19strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; subId=7090; spikeInPool=Nist14; labVersion=iIDR; seqPlatform=Illumina_GA2x; md5sum=7b4b0a7b5a8b27777bd7308c3624a5ef;
Thymus  Contigs19AWC,19BWCLID20922,LID20923wgEncodeEM002518GSM900192 12 MBbedRnaElements2012-02-092012-11-09strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; subId=5582; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksContigs; md5sum=31437fad69c795caea65a3c511cb5907;
Thymus2Alignments19BWCLID20923wgEncodeEM002518  6.2 MBbam.bai2012-07-292013-04-29strain=C57BL/6J; sex=U; age=adult-8wks; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; dataVersion=ENCODE Jul 2012 Freeze; subId=7746; spikeInPool=Nist14; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep2V2; md5sum=ced8419825e2bacfafc4893bb461cc40;
Whole Brain  Transcript ENSEMBL V6525BWC,25AWCLID46988,LID46987wgEncodeEM003055GSM10005723.0 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7798; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=617bd3a52bf84ddc33c0459face04906;
Whole Brain  Transcripts De novo25AWC,25BWCLID46987,LID46988wgEncodeEM003055GSM10005725.6 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7784; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=085e719ea83dfa57d177f75aa489237f;
Whole Brain1Alignments25AWCLID46987wgEncodeEM003055  8.5 MBbam.bai2012-07-122013-04-12strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7346; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep1; md5sum=2be83657d56d287e17e6137526558252;
Whole Brain1Alignments25AWCLID46987wgEncodeEM003055   20 GBbam2012-07-122013-04-12strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7346; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep1; md5sum=0a5b9c11a856751fe654e40313193798;
Whole Brain1Minus Raw signal25AWCLID46987wgEncodeEM003055GSM1000572296 MBbigWig2012-07-122013-04-12strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7346; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfMinusRawRep1; md5sum=256b55a79b7d3e8cfcd4b7e38090da60;
Whole Brain1Plus Raw signal25AWCLID46987wgEncodeEM003055GSM1000572296 MBbigWig2012-07-122013-04-12strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7346; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfPlusRawRep1; md5sum=6abc69ad571cf965dd2c8c0821136e62;
Whole Brain1Spike-ins25AWCLID46987wgEncodeEM003055GSM1000572856 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7817; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=1f3a7602ce98104a68fc83b4edda39dc;
Whole Brain2Minus Raw signal25BWCLID46988wgEncodeEM003055GSM1000572359 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7386; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfMinusRawRep2; md5sum=112ee5b719b2e35661798b0ba7a406ad;
Whole Brain2Plus Raw signal25BWCLID46988wgEncodeEM003055GSM1000572360 MBbigWig2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7386; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfPlusRawRep2; md5sum=648c27e62f3e2db0ce323d9d21a80b2e;
Whole Brain2Spike-ins25BWCLID46988wgEncodeEM003055GSM1000572640 MBspikeins2012-07-312013-05-01strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7824; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=de4feeab5f3cbbd0435bbc10781e3ee6;
Whole Brain  Junctions25AWC,25BWCLID46987,LID46988wgEncodeEM003055GSM1000572 15 MBbedRnaElements2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7368; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfJunctions; md5sum=677626e67c66fc5c29dd34f1bb6b59da;
Whole Brain  Genes ENSEMBL V6525BWC,25AWCLID46988,LID46987wgEncodeEM003055GSM10005722.7 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7798; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=de2d798ce107fd5cda7383f817c0ebc7;
Whole Brain  Genes De Novo25AWC,25BWCLID46987,LID46988wgEncodeEM003055GSM10005725.0 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7784; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=c90fe2a0bdc02225920d39f6d10cdc9e;
Whole Brain1FastqRd125AWCLID46987wgEncodeEM003055GSM1000572 12 GBfastq2012-07-122013-04-12strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7346; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=a66fd8ae01f790b524188fe8e98ea65d;
Whole Brain1FastqRd225AWCLID46987wgEncodeEM003055GSM1000572 13 GBfastq2012-07-122013-04-12strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7346; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=e2245378ddaf5712af454705a59ebe49;
Whole Brain2FastqRd125BWCLID46988wgEncodeEM003055GSM1000572 13 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7386; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=3d24d3d022aa8cffe60a11f3a1d0e24c;
Whole Brain2FastqRd225BWCLID46988wgEncodeEM003055GSM1000572 13 GBfastq2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7386; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=0c216bfabff62bdc40b7a3c36c6ff7c1;
Whole Brain  Exons ENSEMBL V6525BWC,25AWCLID46988,LID46987wgEncodeEM003055GSM1000572 13 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7798; spikeInPool=Nist14; labVersion=Ensembl_objects_only,no_Cufflinks; seqPlatform=Illumina_HiSeq_2000; md5sum=e919c230479a83f6de4470fb70b8f48e;
Whole Brain  ExonsDenovo25AWC,25BWCLID46987,LID46988wgEncodeEM003055GSM1000572 26 MBgtf2012-07-302013-04-30strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7784; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; md5sum=3722a2ec14a758eda54ea829e9031ebb;
Whole Brain  Contigs25AWC,25BWCLID46987,LID46988wgEncodeEM003055GSM1000572 13 MBbedRnaElements2012-07-132013-04-13strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7368; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfContigs; md5sum=8e555219628528f817bf4e296d9cd3d2;
Whole Brain2Alignments25BWCLID46988wgEncodeEM003055  8.7 MBbam.bai2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7386; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep2; md5sum=79c3c2c2143276093f2cd4befcf63531;
Whole Brain2Alignments25BWCLID46988wgEncodeEM003055   21 GBbam2012-07-142013-04-14strain=C57BL/6J; sex=U; age=E14.5; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; subId=7386; spikeInPool=Nist14; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep2; md5sum=2b3a97bb9632c73ae85a7ce0a32d8522;
    660 filesRestriction Policy

Description

These tracks were generated by the ENCODE Consortium. They contain information about mouse RNAs greater than 200 nucleotides in length obtained as short reads off the Illumina platform. Data are available from biological replicates.

Display Conventions and Configuration

This track is a multi-view composite track that contains multiple data types (views). For each view, there are multiple subtracks that display individually on the browser. Instructions for configuring multi-view tracks are here.

To show only selected subtracks, uncheck the boxes next to the tracks that you wish to hide.

Color differences among the views are arbitrary. They provide a visual cue for distinguishing between the different cell types and compartments.

Contigs
The Contigs represent blocks of overlapping mapped reads from the pooled biological replicates.
Raw Signals
The Plus Raw Signal and Minus Raw Signal views show the density of mapped reads on the plus and minus strands (wiggle format), respectively.
Alignments
The Alignments view shows individual reads mapped from biological replicates to the genome and indicates where bases may mismatch. Every mapped read is displayed, i.e. uncollapsed. The alignment file follows the standard SAM format of Bowtie output. See the Bowtie Manual for more information about the SAM Bowtie output (including other tags) and the SAM Format Specification for more information on the SAM/BAM file format.
Splice Junctions
Subset of aligned reads that cross splice junctions. Specific column specifications can be found in the supplemental directory.

Metadata for a particular subtrack can be found by clicking the down arrow in the list of subtracks.

Additional views are available on the Downloads page.

Methods

Tissue Samples

Individual tissues were harvested from mouse strain C57BL/6J at different timepoints according to ENCODE cell culture protocols. Whenever possible, biological replicates were obtained from littermates.

Library Preparation

The published cDNA sequencing protocol was used. This protocol generates directional libraries and reports the transcripts' strand of origin. Exogenous RNA spike-ins were added to each endogenous RNA isolate and carried through library construction and sequencing. The spike-in sequence and the concentrations are available for download in the supplemental directory.

Sequencing and Mapping

The libraries were sequenced on the Illumina platform (either GAIIx or Hi-Seq) in mate-pair fashion (either pair-end 76 or pair-end 101) to an average depth of 100 million mate-pairs. The data were mapped against mm9 using Spliced Transcript Alignment and Reconstruction (STAR) written by Alex Dobin (CSHL). More information about STAR, including the parameters used for these data, is available from the Gingeras lab.

For each experiment, there are additional element data views data files available for download. These elements were assessed for reproducibility using a nonparametric irreproducible detection (IDR) rate script. The IDR values for each element are included in the files for end-users to use as a threshold. An IDR value of 0.1 means that the probability of detecting that element in a third experiment equivalent in depth to the sum of the bioreplicates is 90%. In addition, expression values for annotated genes, transcripts and exons were computed. Further explanation of these files is available for download in the supplemental directory.

Verification

FPKM (fragments per kilobase of exon per million fragments mapped) values were calculated for annotated exons and Spearman correlation coefficients were computed. In general, Rho values are greater than 0.90 between biological replicates.

Release Notes

This is release 3 (Sept 2012) of this track. It adds data for bladder, cerebellum, CNS, cortex, frontal lobe, limb, liver, placenta, and whole brain. The samples for CNS, liver, limb and whole brain vary over age (developmental stage). This release also contains replacement BAM files for the previous ones had the second read reverse complemented.

Credits

These data were generated and analyzed by the transcriptome group at Cold Spring Harbor Laboratories and the Center for Genomic Regulation (CRG in Barcelona), who are participants in the ENCODE Transcriptome Group.

Contacts: Carrie Davis (experimental), Roderic Guigo and lab (data processing), Tom Gingeras (primary investigator)

References

Jiang L, Schlesinger F, Davis CA, Zhang Y, Li R, Salit M, Gingeras TR, Oliver B. Synthetic spike-in standards for RNA-seq experiments. Genome Res. 2011 Sep;21(9):1543-51. PMID: 21816910; PMC: PMC3166838

Parkhomchuk D, Borodina T, Amstislavskiy V, Banaru M, Hallen L, Krobitsch S, Lehrach H, Soldatov A. Transcriptome analysis by strand-specific sequencing of complementary DNA. Nucleic Acids Res. 2009 Oct;37(18):e123. PMID: 19620212; PMC: PMC2764448

Data Release Policy

Data users may freely use ENCODE data, but may not, without prior consent, submit publications that use an unpublished ENCODE dataset until nine months following the release of the dataset. This date is listed in the Restricted Until column, above. The full data release policy for ENCODE is available here.